Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUBP1P53384 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUBP1P53384 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NUBP1P53384 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.28■□□□□ 0.2
NUBP1P53384 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NUBP1P53384 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NUBP1P53384 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUBP1P53384 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUBP1P53384 AL590240.2-201ENST00000413370 894 ntBASIC16.28■□□□□ 0.2
NUBP1P53384 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.28■□□□□ 0.2
NUBP1P53384 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC16.28■□□□□ 0.2
NUBP1P53384 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.28■□□□□ 0.2
NUBP1P53384 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NUBP1P53384 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NUBP1P53384 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.28■□□□□ 0.2
NUBP1P53384 TMEM198B-204ENST00000484016 896 ntBASIC16.28■□□□□ 0.2
NUBP1P53384 AC091804.1-201ENST00000486888 567 ntBASIC16.28■□□□□ 0.2
NUBP1P53384 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC16.28■□□□□ 0.2
NUBP1P53384 FAM86HP-204ENST00000513466 959 ntBASIC16.28■□□□□ 0.2
NUBP1P53384 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.28■□□□□ 0.2
NUBP1P53384 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.28■□□□□ 0.2
NUBP1P53384 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NUBP1P53384 AC069208.1-206ENST00000538905 832 ntTSL 4 BASIC16.28■□□□□ 0.2
NUBP1P53384 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.28■□□□□ 0.2
NUBP1P53384 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.28■□□□□ 0.2
NUBP1P53384 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
NUBP1P53384 AC044839.1-208ENST00000634902 917 ntTSL 5 BASIC16.28■□□□□ 0.2
NUBP1P53384 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUBP1P53384 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NUBP1P53384 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUBP1P53384 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.28■□□□□ 0.2
NUBP1P53384 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NUBP1P53384 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
NUBP1P53384 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUBP1P53384 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NUBP1P53384 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.27■□□□□ 0.2
NUBP1P53384 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.27■□□□□ 0.2
NUBP1P53384 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NUBP1P53384 AC007342.9-201ENST00000623877 1385 ntBASIC16.27■□□□□ 0.2
NUBP1P53384 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NUBP1P53384 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.27■□□□□ 0.2
NUBP1P53384 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NUBP1P53384 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.27■□□□□ 0.2
NUBP1P53384 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.27■□□□□ 0.2
NUBP1P53384 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC16.27■□□□□ 0.2
NUBP1P53384 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC16.27■□□□□ 0.2
NUBP1P53384 AC004898.1-201ENST00000451057 766 ntBASIC16.27■□□□□ 0.2
NUBP1P53384 AC104306.2-201ENST00000451877 341 ntBASIC16.27■□□□□ 0.2
NUBP1P53384 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.27■□□□□ 0.2
NUBP1P53384 PTP4A2-201ENST00000457805 1032 ntTSL 2 BASIC16.27■□□□□ 0.2
NUBP1P53384 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.27■□□□□ 0.2
NUBP1P53384 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 RPL13AP25-201ENST00000484130 612 ntBASIC16.27■□□□□ 0.2
NUBP1P53384 LDHBP3-201ENST00000514909 822 ntBASIC16.27■□□□□ 0.2
NUBP1P53384 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NUBP1P53384 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC16.27■□□□□ 0.2
NUBP1P53384 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
NUBP1P53384 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NUBP1P53384 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 AL391069.4-201ENST00000609583 481 ntBASIC16.27■□□□□ 0.2
NUBP1P53384 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 AC079414.3-201ENST00000612986 1090 ntBASIC16.27■□□□□ 0.2
NUBP1P53384 AC253576.2-201ENST00000618815 580 ntBASIC16.27■□□□□ 0.2
NUBP1P53384 AC009542.2-202ENST00000619004 1067 ntBASIC16.27■□□□□ 0.2
NUBP1P53384 AC106858.1-201ENST00000637497 429 ntBASIC16.27■□□□□ 0.2
NUBP1P53384 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.27■□□□□ 0.2
NUBP1P53384 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NUBP1P53384 AC135776.1-201ENST00000319817 2481 ntBASIC16.27■□□□□ 0.19
NUBP1P53384 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.27■□□□□ 0.19
NUBP1P53384 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
NUBP1P53384 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.27■□□□□ 0.19
NUBP1P53384 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NUBP1P53384 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 AL607033.1-201ENST00000623900 1599 ntBASIC16.26■□□□□ 0.19
NUBP1P53384 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NUBP1P53384 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.26■□□□□ 0.19
NUBP1P53384 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NUBP1P53384 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms