Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.06■□□□□ 0.48
LBX1P52954 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LBX1P52954 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LBX1P52954 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.06■□□□□ 0.48
LBX1P52954 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
LBX1P52954 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LBX1P52954 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
LBX1P52954 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LBX1P52954 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LBX1P52954 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LBX1P52954 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
LBX1P52954 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LBX1P52954 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LBX1P52954 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LBX1P52954 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LBX1P52954 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.05■□□□□ 0.48
LBX1P52954 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LBX1P52954 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.05■□□□□ 0.48
LBX1P52954 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LBX1P52954 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LBX1P52954 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.05■□□□□ 0.48
LBX1P52954 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LBX1P52954 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.05■□□□□ 0.48
LBX1P52954 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LBX1P52954 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LBX1P52954 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.05■□□□□ 0.48
LBX1P52954 DNM1P51-201ENST00000558149 522 ntBASIC18.05■□□□□ 0.48
LBX1P52954 AC005730.2-201ENST00000564549 1184 ntBASIC18.05■□□□□ 0.48
LBX1P52954 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC18.05■□□□□ 0.48
LBX1P52954 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC18.05■□□□□ 0.48
LBX1P52954 AC020922.3-201ENST00000595064 547 ntBASIC18.05■□□□□ 0.48
LBX1P52954 AC093813.1-201ENST00000605066 256 ntBASIC18.05■□□□□ 0.48
LBX1P52954 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
LBX1P52954 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.05■□□□□ 0.48
LBX1P52954 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LBX1P52954 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LBX1P52954 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LBX1P52954 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.04■□□□□ 0.48
LBX1P52954 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LBX1P52954 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LBX1P52954 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LBX1P52954 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LBX1P52954 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LBX1P52954 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LBX1P52954 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.04■□□□□ 0.48
LBX1P52954 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.04■□□□□ 0.48
LBX1P52954 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.04■□□□□ 0.48
LBX1P52954 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LBX1P52954 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LBX1P52954 AC026410.3-201ENST00000514280 936 ntBASIC18.04■□□□□ 0.48
LBX1P52954 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC18.04■□□□□ 0.48
LBX1P52954 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC18.04■□□□□ 0.48
LBX1P52954 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LBX1P52954 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LBX1P52954 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LBX1P52954 SLC25A24-204ENST00000569674 2357 ntBASIC18.04■□□□□ 0.48
LBX1P52954 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.04■□□□□ 0.48
LBX1P52954 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
LBX1P52954 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.03■□□□□ 0.48
LBX1P52954 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.03■□□□□ 0.48
LBX1P52954 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.03■□□□□ 0.48
LBX1P52954 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LBX1P52954 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.03■□□□□ 0.48
LBX1P52954 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.03■□□□□ 0.48
LBX1P52954 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LBX1P52954 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.03■□□□□ 0.48
LBX1P52954 PIN4P1-201ENST00000451079 396 ntBASIC18.03■□□□□ 0.48
LBX1P52954 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 NEU3-205ENST00000531619 582 ntTSL 5 BASIC18.03■□□□□ 0.48
LBX1P52954 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.03■□□□□ 0.48
LBX1P52954 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC18.03■□□□□ 0.48
LBX1P52954 AC138466.4-201ENST00000623965 852 ntBASIC18.03■□□□□ 0.48
LBX1P52954 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.03■□□□□ 0.48
LBX1P52954 AC006453.1-201ENST00000636037 1257 ntBASIC18.03■□□□□ 0.48
LBX1P52954 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.03■□□□□ 0.48
LBX1P52954 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.03■□□□□ 0.48
LBX1P52954 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.03■□□□□ 0.48
LBX1P52954 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LBX1P52954 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
LBX1P52954 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LBX1P52954 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
LBX1P52954 KRT8P35-201ENST00000483942 1338 ntBASIC18.02■□□□□ 0.48
LBX1P52954 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms