Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.45■□□□□ 0.86
COL15A1P39059 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
COL15A1P39059 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL15A1P39059 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.45■□□□□ 0.86
COL15A1P39059 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
COL15A1P39059 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.45■□□□□ 0.86
COL15A1P39059 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.45■□□□□ 0.86
COL15A1P39059 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL15A1P39059 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL15A1P39059 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL15A1P39059 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL15A1P39059 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
COL15A1P39059 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL15A1P39059 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL15A1P39059 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL15A1P39059 BOLA2P3-201ENST00000404566 256 ntBASIC20.45■□□□□ 0.86
COL15A1P39059 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.45■□□□□ 0.86
COL15A1P39059 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.45■□□□□ 0.86
COL15A1P39059 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.45■□□□□ 0.86
COL15A1P39059 AC104596.2-201ENST00000512793 793 ntBASIC20.45■□□□□ 0.86
COL15A1P39059 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.45■□□□□ 0.86
COL15A1P39059 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.45■□□□□ 0.86
COL15A1P39059 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC20.45■□□□□ 0.86
COL15A1P39059 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL15A1P39059 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL15A1P39059 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL15A1P39059 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL15A1P39059 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COL15A1P39059 AC005622.1-201ENST00000636801 1703 ntBASIC20.44■□□□□ 0.86
COL15A1P39059 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL15A1P39059 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL15A1P39059 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.44■□□□□ 0.86
COL15A1P39059 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL15A1P39059 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL15A1P39059 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL15A1P39059 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.44■□□□□ 0.86
COL15A1P39059 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL15A1P39059 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL15A1P39059 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.44■□□□□ 0.86
COL15A1P39059 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL15A1P39059 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.44■□□□□ 0.86
COL15A1P39059 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL15A1P39059 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
COL15A1P39059 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
COL15A1P39059 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL15A1P39059 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
COL15A1P39059 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL15A1P39059 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL15A1P39059 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
COL15A1P39059 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL15A1P39059 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC20.44■□□□□ 0.86
COL15A1P39059 EEF1DP4-201ENST00000446006 880 ntBASIC20.44■□□□□ 0.86
COL15A1P39059 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.44■□□□□ 0.86
COL15A1P39059 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.44■□□□□ 0.86
COL15A1P39059 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC20.44■□□□□ 0.86
COL15A1P39059 MIR4525-201ENST00000580000 75 ntBASIC20.44■□□□□ 0.86
COL15A1P39059 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.44■□□□□ 0.86
COL15A1P39059 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.44■□□□□ 0.86
COL15A1P39059 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL15A1P39059 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.44■□□□□ 0.86
COL15A1P39059 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL15A1P39059 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
COL15A1P39059 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COL15A1P39059 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL15A1P39059 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.43■□□□□ 0.86
COL15A1P39059 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL15A1P39059 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.43■□□□□ 0.86
COL15A1P39059 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
COL15A1P39059 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
COL15A1P39059 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.43■□□□□ 0.86
COL15A1P39059 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL15A1P39059 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL15A1P39059 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.43■□□□□ 0.86
COL15A1P39059 AC018665.1-201ENST00000622927 1362 ntBASIC20.43■□□□□ 0.86
COL15A1P39059 AD000864.1-201ENST00000624076 2295 ntBASIC20.43■□□□□ 0.86
COL15A1P39059 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL15A1P39059 FAM86MP-201ENST00000340703 885 ntBASIC20.43■□□□□ 0.86
COL15A1P39059 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL15A1P39059 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL15A1P39059 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.43■□□□□ 0.86
COL15A1P39059 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL15A1P39059 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.43■□□□□ 0.86
COL15A1P39059 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.43■□□□□ 0.86
COL15A1P39059 AC104989.1-201ENST00000519711 778 ntBASIC20.43■□□□□ 0.86
COL15A1P39059 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.43■□□□□ 0.86
COL15A1P39059 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.43■□□□□ 0.86
COL15A1P39059 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL15A1P39059 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.43■□□□□ 0.86
COL15A1P39059 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC20.43■□□□□ 0.86
COL15A1P39059 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL15A1P39059 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
COL15A1P39059 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL15A1P39059 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.43■□□□□ 0.86
COL15A1P39059 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL15A1P39059 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL15A1P39059 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL15A1P39059 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
COL15A1P39059 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL15A1P39059 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
COL15A1P39059 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms