Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RPA3P35244 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.56■□□□□ 0.24
RPA3P35244 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.56■□□□□ 0.24
RPA3P35244 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.56■□□□□ 0.24
RPA3P35244 AC073621.1-201ENST00000392730 636 ntBASIC16.56■□□□□ 0.24
RPA3P35244 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.56■□□□□ 0.24
RPA3P35244 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.56■□□□□ 0.24
RPA3P35244 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 RPS15P9-201ENST00000494093 319 ntBASIC16.56■□□□□ 0.24
RPA3P35244 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.56■□□□□ 0.24
RPA3P35244 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.56■□□□□ 0.24
RPA3P35244 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.56■□□□□ 0.24
RPA3P35244 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.56■□□□□ 0.24
RPA3P35244 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.56■□□□□ 0.24
RPA3P35244 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.56■□□□□ 0.24
RPA3P35244 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RPA3P35244 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.56■□□□□ 0.24
RPA3P35244 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.56■□□□□ 0.24
RPA3P35244 AL805961.1-202ENST00000641562 540 ntBASIC16.56■□□□□ 0.24
RPA3P35244 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RPA3P35244 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.56■□□□□ 0.24
RPA3P35244 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.56■□□□□ 0.24
RPA3P35244 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
RPA3P35244 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.56■□□□□ 0.24
RPA3P35244 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.56■□□□□ 0.24
RPA3P35244 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.56■□□□□ 0.24
RPA3P35244 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
RPA3P35244 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RPA3P35244 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.55■□□□□ 0.24
RPA3P35244 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.55■□□□□ 0.24
RPA3P35244 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
RPA3P35244 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.55■□□□□ 0.24
RPA3P35244 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RPA3P35244 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RPA3P35244 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.55■□□□□ 0.24
RPA3P35244 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RPA3P35244 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
RPA3P35244 FDX1P1-201ENST00000449115 551 ntBASIC16.55■□□□□ 0.24
RPA3P35244 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.55■□□□□ 0.24
RPA3P35244 RNA5SP419-201ENST00000515908 135 ntBASIC16.55■□□□□ 0.24
RPA3P35244 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RPA3P35244 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.55■□□□□ 0.24
RPA3P35244 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.55■□□□□ 0.24
RPA3P35244 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.55■□□□□ 0.24
RPA3P35244 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RPA3P35244 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
RPA3P35244 PI4KAP1-204ENST00000612579 1703 ntBASIC16.55■□□□□ 0.24
RPA3P35244 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RPA3P35244 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RPA3P35244 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.55■□□□□ 0.24
RPA3P35244 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RPA3P35244 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RPA3P35244 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RPA3P35244 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.54■□□□□ 0.24
RPA3P35244 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.54■□□□□ 0.24
RPA3P35244 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPA3P35244 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.54■□□□□ 0.24
RPA3P35244 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.54■□□□□ 0.24
RPA3P35244 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPA3P35244 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPA3P35244 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RPA3P35244 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPA3P35244 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPA3P35244 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.54■□□□□ 0.24
RPA3P35244 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPA3P35244 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.54■□□□□ 0.24
RPA3P35244 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPA3P35244 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPA3P35244 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.54■□□□□ 0.24
RPA3P35244 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RPA3P35244 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPA3P35244 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPA3P35244 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPA3P35244 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.54■□□□□ 0.24
RPA3P35244 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms