Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
USP6P35125 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
USP6P35125 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP6P35125 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP6P35125 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
USP6P35125 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP6P35125 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP6P35125 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC21.69■■□□□ 1.06
USP6P35125 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP6P35125 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP6P35125 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP6P35125 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
USP6P35125 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC21.69■■□□□ 1.06
USP6P35125 ME2P1-201ENST00000426028 1970 ntBASIC21.69■■□□□ 1.06
USP6P35125 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP6P35125 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC21.69■■□□□ 1.06
USP6P35125 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.69■■□□□ 1.06
USP6P35125 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP6P35125 AC099336.1-201ENST00000417053 1171 ntBASIC21.69■■□□□ 1.06
USP6P35125 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC21.69■■□□□ 1.06
USP6P35125 USB1-202ENST00000423271 1217 ntTSL 2 BASIC21.69■■□□□ 1.06
USP6P35125 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP6P35125 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC21.69■■□□□ 1.06
USP6P35125 TDH-203ENST00000531764 1110 ntBASIC21.69■■□□□ 1.06
USP6P35125 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP6P35125 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC21.69■■□□□ 1.06
USP6P35125 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC21.69■■□□□ 1.06
USP6P35125 AC120045.2-201ENST00000567334 178 ntBASIC21.69■■□□□ 1.06
USP6P35125 MIR4525-201ENST00000580000 75 ntBASIC21.69■■□□□ 1.06
USP6P35125 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC21.69■■□□□ 1.06
USP6P35125 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC21.69■■□□□ 1.06
USP6P35125 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC21.69■■□□□ 1.06
USP6P35125 AC093525.8-201ENST00000624099 1342 ntBASIC21.69■■□□□ 1.06
USP6P35125 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC21.69■■□□□ 1.06
USP6P35125 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC21.69■■□□□ 1.06
USP6P35125 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP6P35125 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP6P35125 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC21.69■■□□□ 1.06
USP6P35125 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP6P35125 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP6P35125 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6P35125 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC21.68■■□□□ 1.06
USP6P35125 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC21.68■■□□□ 1.06
USP6P35125 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
USP6P35125 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.68■■□□□ 1.06
USP6P35125 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
USP6P35125 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6P35125 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6P35125 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6P35125 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6P35125 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
USP6P35125 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6P35125 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP6P35125 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
USP6P35125 APOA1-205ENST00000375329 927 ntTSL 2 BASIC21.68■■□□□ 1.06
USP6P35125 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6P35125 AC005229.1-201ENST00000392885 409 ntBASIC21.68■■□□□ 1.06
USP6P35125 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC21.68■■□□□ 1.06
USP6P35125 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC21.68■■□□□ 1.06
USP6P35125 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6P35125 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP6P35125 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC21.68■■□□□ 1.06
USP6P35125 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC21.68■■□□□ 1.06
USP6P35125 AC097359.3-201ENST00000603982 1210 ntBASIC21.68■■□□□ 1.06
USP6P35125 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC21.68■■□□□ 1.06
USP6P35125 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.68■■□□□ 1.06
USP6P35125 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6P35125 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.68■■□□□ 1.06
USP6P35125 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6P35125 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
USP6P35125 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP6P35125 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6P35125 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
USP6P35125 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP6P35125 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP6P35125 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.67■■□□□ 1.06
USP6P35125 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP6P35125 VILL-207ENST00000465644 1857 ntTSL 5 BASIC21.67■■□□□ 1.06
USP6P35125 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP6P35125 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP6P35125 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP6P35125 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP6P35125 LBX2-201ENST00000341396 886 ntTSL 3 BASIC21.67■■□□□ 1.06
USP6P35125 RPF1-202ENST00000370656 724 ntTSL 2 BASIC21.67■■□□□ 1.06
USP6P35125 SOCS2P1-201ENST00000417727 557 ntBASIC21.67■■□□□ 1.06
USP6P35125 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC21.67■■□□□ 1.06
USP6P35125 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC21.67■■□□□ 1.06
USP6P35125 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC21.67■■□□□ 1.06
USP6P35125 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC21.67■■□□□ 1.06
USP6P35125 AC000095.1-201ENST00000603208 874 ntBASIC21.67■■□□□ 1.06
USP6P35125 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP6P35125 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
USP6P35125 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
USP6P35125 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP6P35125 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP6P35125 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP6P35125 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms