Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NCLP19338 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NCLP19338 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NCLP19338 SPDYE21P-201ENST00000413323 827 ntBASIC19.54■□□□□ 0.72
NCLP19338 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.54■□□□□ 0.72
NCLP19338 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.54■□□□□ 0.72
NCLP19338 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.54■□□□□ 0.72
NCLP19338 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NCLP19338 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
NCLP19338 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NCLP19338 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NCLP19338 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.54■□□□□ 0.72
NCLP19338 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NCLP19338 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.54■□□□□ 0.72
NCLP19338 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NCLP19338 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NCLP19338 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.54■□□□□ 0.72
NCLP19338 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NCLP19338 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
NCLP19338 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NCLP19338 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NCLP19338 OR2I1P-209ENST00000641730 5365 ntBASIC19.53■□□□□ 0.72
NCLP19338 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.53■□□□□ 0.72
NCLP19338 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NCLP19338 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC19.53■□□□□ 0.72
NCLP19338 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NCLP19338 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.53■□□□□ 0.72
NCLP19338 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NCLP19338 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NCLP19338 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NCLP19338 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.53■□□□□ 0.72
NCLP19338 LINC00982-205ENST00000420957 435 ntBASIC19.53■□□□□ 0.72
NCLP19338 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.53■□□□□ 0.72
NCLP19338 AC132008.2-207ENST00000454517 770 ntBASIC19.53■□□□□ 0.72
NCLP19338 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.53■□□□□ 0.72
NCLP19338 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
NCLP19338 AL662844.1-201ENST00000546340 181 ntBASIC19.53■□□□□ 0.72
NCLP19338 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.53■□□□□ 0.72
NCLP19338 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.53■□□□□ 0.72
NCLP19338 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.53■□□□□ 0.72
NCLP19338 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NCLP19338 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC19.53■□□□□ 0.72
NCLP19338 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NCLP19338 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NCLP19338 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NCLP19338 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.53■□□□□ 0.72
NCLP19338 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NCLP19338 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.53■□□□□ 0.72
NCLP19338 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NCLP19338 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NCLP19338 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NCLP19338 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NCLP19338 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NCLP19338 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NCLP19338 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.53■□□□□ 0.72
NCLP19338 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NCLP19338 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.52■□□□□ 0.72
NCLP19338 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
NCLP19338 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NCLP19338 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
NCLP19338 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.52■□□□□ 0.72
NCLP19338 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NCLP19338 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NCLP19338 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.52■□□□□ 0.72
NCLP19338 MRPL3P1-201ENST00000400109 1033 ntBASIC19.52■□□□□ 0.72
NCLP19338 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.52■□□□□ 0.72
NCLP19338 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NCLP19338 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.52■□□□□ 0.72
NCLP19338 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.52■□□□□ 0.72
NCLP19338 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.52■□□□□ 0.72
NCLP19338 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NCLP19338 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NCLP19338 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NCLP19338 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.52■□□□□ 0.72
NCLP19338 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NCLP19338 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC19.52■□□□□ 0.72
NCLP19338 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
NCLP19338 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NCLP19338 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NCLP19338 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NCLP19338 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.51■□□□□ 0.71
NCLP19338 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCLP19338 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCLP19338 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.51■□□□□ 0.71
NCLP19338 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NCLP19338 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCLP19338 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NCLP19338 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCLP19338 PCDHA3-202ENST00000532566 4594 ntBASIC19.51■□□□□ 0.71
NCLP19338 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCLP19338 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCLP19338 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.51■□□□□ 0.71
NCLP19338 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NCLP19338 LINC00895-201ENST00000629028 1637 ntBASIC19.51■□□□□ 0.71
NCLP19338 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCLP19338 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCLP19338 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NCLP19338 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCLP19338 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NCLP19338 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms