Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP1P11387 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.17■□□□□ 0.66
TOP1P11387 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP1P11387 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
TOP1P11387 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TOP1P11387 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
TOP1P11387 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.16■□□□□ 0.66
TOP1P11387 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
TOP1P11387 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP1P11387 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.16■□□□□ 0.66
TOP1P11387 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
TOP1P11387 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.16■□□□□ 0.66
TOP1P11387 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP1P11387 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
TOP1P11387 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP1P11387 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP1P11387 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP1P11387 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TOP1P11387 CICP6-201ENST00000457191 2729 ntBASIC19.16■□□□□ 0.66
TOP1P11387 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TOP1P11387 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.16■□□□□ 0.66
TOP1P11387 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
TOP1P11387 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
TOP1P11387 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP1P11387 HMGN1P19-201ENST00000436976 333 ntBASIC19.16■□□□□ 0.66
TOP1P11387 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP1P11387 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP1P11387 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.16■□□□□ 0.66
TOP1P11387 DUX4L27-201ENST00000554796 1261 ntBASIC19.16■□□□□ 0.66
TOP1P11387 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
TOP1P11387 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP1P11387 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TOP1P11387 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP1P11387 AC005622.1-201ENST00000636801 1703 ntBASIC19.16■□□□□ 0.66
TOP1P11387 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP1P11387 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.16■□□□□ 0.66
TOP1P11387 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TOP1P11387 AC079328.2-201ENST00000561241 3354 ntBASIC19.16■□□□□ 0.66
TOP1P11387 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
TOP1P11387 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.16■□□□□ 0.66
TOP1P11387 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.16■□□□□ 0.66
TOP1P11387 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TOP1P11387 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TOP1P11387 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TOP1P11387 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.15■□□□□ 0.66
TOP1P11387 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.15■□□□□ 0.66
TOP1P11387 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.15■□□□□ 0.66
TOP1P11387 AC125807.1-201ENST00000483097 614 ntBASIC19.15■□□□□ 0.66
TOP1P11387 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.15■□□□□ 0.66
TOP1P11387 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.15■□□□□ 0.66
TOP1P11387 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TOP1P11387 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.15■□□□□ 0.66
TOP1P11387 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TOP1P11387 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.15■□□□□ 0.66
TOP1P11387 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
TOP1P11387 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TOP1P11387 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TOP1P11387 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.14■□□□□ 0.66
TOP1P11387 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
TOP1P11387 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.14■□□□□ 0.66
TOP1P11387 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TOP1P11387 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TOP1P11387 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.14■□□□□ 0.66
TOP1P11387 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.14■□□□□ 0.65
TOP1P11387 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TOP1P11387 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TOP1P11387 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TOP1P11387 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TOP1P11387 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TOP1P11387 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.14■□□□□ 0.65
TOP1P11387 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TOP1P11387 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TOP1P11387 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.14■□□□□ 0.65
TOP1P11387 AC107890.1-201ENST00000422478 521 ntBASIC19.14■□□□□ 0.65
TOP1P11387 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TOP1P11387 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.14■□□□□ 0.65
TOP1P11387 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.14■□□□□ 0.65
TOP1P11387 RNA5SP410-201ENST00000516285 106 ntBASIC19.14■□□□□ 0.65
TOP1P11387 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.14■□□□□ 0.65
TOP1P11387 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms