Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 BX005266.1-201ENST00000473402 457 ntBASIC13.61□□□□□ -0.23
CTSDP07339 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.61□□□□□ -0.23
CTSDP07339 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.61□□□□□ -0.23
CTSDP07339 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.61□□□□□ -0.23
CTSDP07339 AL022326.1-202ENST00000641533 845 ntBASIC13.61□□□□□ -0.23
CTSDP07339 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CTSDP07339 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CTSDP07339 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.61□□□□□ -0.23
CTSDP07339 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CTSDP07339 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.61□□□□□ -0.23
CTSDP07339 AC008677.1-201ENST00000519230 1561 ntBASIC13.61□□□□□ -0.23
CTSDP07339 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.61□□□□□ -0.23
CTSDP07339 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.61□□□□□ -0.23
CTSDP07339 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CTSDP07339 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.61□□□□□ -0.23
CTSDP07339 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.6□□□□□ -0.23
CTSDP07339 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.6□□□□□ -0.23
CTSDP07339 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.6□□□□□ -0.23
CTSDP07339 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.6□□□□□ -0.23
CTSDP07339 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.6□□□□□ -0.23
CTSDP07339 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CTSDP07339 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.6□□□□□ -0.23
CTSDP07339 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CTSDP07339 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.6□□□□□ -0.23
CTSDP07339 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.6□□□□□ -0.23
CTSDP07339 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 TSSC2-201ENST00000450217 709 ntBASIC13.6□□□□□ -0.23
CTSDP07339 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.6□□□□□ -0.23
CTSDP07339 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.6□□□□□ -0.23
CTSDP07339 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.6□□□□□ -0.23
CTSDP07339 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.6□□□□□ -0.23
CTSDP07339 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.6□□□□□ -0.23
CTSDP07339 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CTSDP07339 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.6□□□□□ -0.23
CTSDP07339 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.6□□□□□ -0.23
CTSDP07339 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CTSDP07339 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.6□□□□□ -0.23
CTSDP07339 AL589182.2-201ENST00000619332 1049 ntBASIC13.6□□□□□ -0.23
CTSDP07339 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CTSDP07339 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CTSDP07339 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.6□□□□□ -0.23
CTSDP07339 AC126755.1-201ENST00000525846 6405 ntBASIC13.6□□□□□ -0.23
CTSDP07339 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSDP07339 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
CTSDP07339 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.59□□□□□ -0.23
CTSDP07339 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CTSDP07339 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CTSDP07339 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.59□□□□□ -0.23
CTSDP07339 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
CTSDP07339 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CTSDP07339 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CTSDP07339 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.59□□□□□ -0.23
CTSDP07339 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.59□□□□□ -0.23
CTSDP07339 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.59□□□□□ -0.23
CTSDP07339 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms