Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
PDGFAP04085 RN7SL371P-201ENST00000578099 267 ntBASIC15.33■□□□□ 0.04
PDGFAP04085 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.33■□□□□ 0.04
PDGFAP04085 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 AL358472.5-202ENST00000641448 1267 ntBASIC15.33■□□□□ 0.04
PDGFAP04085 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PDGFAP04085 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.33■□□□□ 0.04
PDGFAP04085 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.33■□□□□ 0.04
PDGFAP04085 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.33■□□□□ 0.04
PDGFAP04085 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PDGFAP04085 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 AP3S2-216ENST00000617003 1561 ntBASIC15.32■□□□□ 0.04
PDGFAP04085 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PDGFAP04085 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.32■□□□□ 0.04
PDGFAP04085 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PDGFAP04085 PCDHA14-201ENST00000506751 2298 ntBASIC15.32■□□□□ 0.04
PDGFAP04085 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.32■□□□□ 0.04
PDGFAP04085 SPTLC1P1-201ENST00000447199 261 ntBASIC15.32■□□□□ 0.04
PDGFAP04085 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.32■□□□□ 0.04
PDGFAP04085 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.32■□□□□ 0.04
PDGFAP04085 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.32■□□□□ 0.04
PDGFAP04085 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.32■□□□□ 0.04
PDGFAP04085 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.32■□□□□ 0.04
PDGFAP04085 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.32■□□□□ 0.04
PDGFAP04085 AC004233.3-201ENST00000607794 1269 ntBASIC15.32■□□□□ 0.04
PDGFAP04085 AC003101.2-201ENST00000612557 442 ntBASIC15.32■□□□□ 0.04
PDGFAP04085 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PDGFAP04085 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PDGFAP04085 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.32■□□□□ 0.04
PDGFAP04085 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.32■□□□□ 0.04
PDGFAP04085 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PDGFAP04085 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 TCAF2P1-201ENST00000291129 2421 ntBASIC15.32■□□□□ 0.04
PDGFAP04085 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.32■□□□□ 0.04
PDGFAP04085 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFAP04085 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.31■□□□□ 0.04
PDGFAP04085 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.31■□□□□ 0.04
PDGFAP04085 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
PDGFAP04085 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PDGFAP04085 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.31■□□□□ 0.04
PDGFAP04085 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.31■□□□□ 0.04
PDGFAP04085 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.31■□□□□ 0.04
PDGFAP04085 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.31■□□□□ 0.04
PDGFAP04085 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.31■□□□□ 0.04
PDGFAP04085 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.31■□□□□ 0.04
PDGFAP04085 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.31■□□□□ 0.04
PDGFAP04085 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
PDGFAP04085 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.31■□□□□ 0.04
PDGFAP04085 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PDGFAP04085 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.31■□□□□ 0.04
PDGFAP04085 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 EGFEM1P-202ENST00000431685 1563 ntBASIC15.31■□□□□ 0.04
PDGFAP04085 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.31■□□□□ 0.04
PDGFAP04085 AC131009.4-201ENST00000624048 1740 ntBASIC15.31■□□□□ 0.04
PDGFAP04085 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.31■□□□□ 0.04
PDGFAP04085 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.31■□□□□ 0.04
PDGFAP04085 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PDGFAP04085 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFAP04085 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms