Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CHRNA1P02708 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRNA1P02708 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.61■□□□□ 0.41
CHRNA1P02708 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA1P02708 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA1P02708 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA1P02708 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CHRNA1P02708 AL592424.1-201ENST00000563624 1536 ntBASIC17.61■□□□□ 0.41
CHRNA1P02708 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA1P02708 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHRNA1P02708 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA1P02708 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHRNA1P02708 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CHRNA1P02708 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHRNA1P02708 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHRNA1P02708 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA1P02708 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA1P02708 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA1P02708 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.6■□□□□ 0.41
CHRNA1P02708 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA1P02708 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA1P02708 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA1P02708 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.6■□□□□ 0.41
CHRNA1P02708 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA1P02708 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA1P02708 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA1P02708 AC004987.2-201ENST00000395959 1148 ntBASIC17.6■□□□□ 0.41
CHRNA1P02708 MIR1909-201ENST00000411312 80 ntBASIC17.6■□□□□ 0.41
CHRNA1P02708 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA1P02708 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.6■□□□□ 0.41
CHRNA1P02708 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.6■□□□□ 0.41
CHRNA1P02708 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CHRNA1P02708 POU5F1P6-201ENST00000466990 990 ntBASIC17.6■□□□□ 0.41
CHRNA1P02708 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.6■□□□□ 0.41
CHRNA1P02708 RAB43P1-201ENST00000561790 589 ntBASIC17.6■□□□□ 0.41
CHRNA1P02708 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CHRNA1P02708 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA1P02708 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.6■□□□□ 0.41
CHRNA1P02708 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.6■□□□□ 0.41
CHRNA1P02708 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.6■□□□□ 0.41
CHRNA1P02708 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA1P02708 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA1P02708 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA1P02708 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA1P02708 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CHRNA1P02708 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.6■□□□□ 0.41
CHRNA1P02708 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CHRNA1P02708 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.6■□□□□ 0.41
CHRNA1P02708 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRNA1P02708 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CHRNA1P02708 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.6■□□□□ 0.41
CHRNA1P02708 AC012313.1-201ENST00000593393 3059 ntBASIC17.6■□□□□ 0.41
CHRNA1P02708 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
CHRNA1P02708 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.6■□□□□ 0.41
CHRNA1P02708 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA1P02708 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA1P02708 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA1P02708 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA1P02708 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA1P02708 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA1P02708 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CHRNA1P02708 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CHRNA1P02708 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA1P02708 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.59■□□□□ 0.41
CHRNA1P02708 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA1P02708 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA1P02708 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.59■□□□□ 0.41
CHRNA1P02708 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.59■□□□□ 0.41
CHRNA1P02708 AZGP1P1-201ENST00000411909 902 ntBASIC17.59■□□□□ 0.41
CHRNA1P02708 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.59■□□□□ 0.41
CHRNA1P02708 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.59■□□□□ 0.41
CHRNA1P02708 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.59■□□□□ 0.41
CHRNA1P02708 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.59■□□□□ 0.41
CHRNA1P02708 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.59■□□□□ 0.41
CHRNA1P02708 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA1P02708 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.59■□□□□ 0.41
CHRNA1P02708 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.59■□□□□ 0.41
CHRNA1P02708 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA1P02708 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA1P02708 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA1P02708 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA1P02708 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA1P02708 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA1P02708 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA1P02708 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA1P02708 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CHRNA1P02708 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA1P02708 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA1P02708 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA1P02708 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA1P02708 CLK3P2-201ENST00000427566 1453 ntBASIC17.58■□□□□ 0.41
CHRNA1P02708 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA1P02708 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.58■□□□□ 0.41
CHRNA1P02708 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA1P02708 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA1P02708 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA1P02708 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA1P02708 EEF1DP4-201ENST00000446006 880 ntBASIC17.58■□□□□ 0.4
CHRNA1P02708 AC022210.1-201ENST00000449856 793 ntBASIC17.58■□□□□ 0.4
CHRNA1P02708 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms