Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CNOT4O95628 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CNOT4O95628 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
CNOT4O95628 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
CNOT4O95628 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CNOT4O95628 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.55□□□□□ -0.08
CNOT4O95628 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 PRYP6-201ENST00000514804 343 ntBASIC14.55□□□□□ -0.08
CNOT4O95628 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.55□□□□□ -0.08
CNOT4O95628 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.55□□□□□ -0.08
CNOT4O95628 AC015911.4-201ENST00000588022 1070 ntBASIC14.55□□□□□ -0.08
CNOT4O95628 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.55□□□□□ -0.08
CNOT4O95628 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.55□□□□□ -0.08
CNOT4O95628 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.55□□□□□ -0.08
CNOT4O95628 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.55□□□□□ -0.08
CNOT4O95628 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CNOT4O95628 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.55□□□□□ -0.08
CNOT4O95628 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.55□□□□□ -0.08
CNOT4O95628 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CNOT4O95628 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.54□□□□□ -0.08
CNOT4O95628 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNOT4O95628 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CNOT4O95628 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNOT4O95628 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNOT4O95628 AL603756.1-201ENST00000606511 2163 ntBASIC14.54□□□□□ -0.08
CNOT4O95628 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CNOT4O95628 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.54□□□□□ -0.08
CNOT4O95628 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNOT4O95628 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.54□□□□□ -0.08
CNOT4O95628 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNOT4O95628 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.54□□□□□ -0.08
CNOT4O95628 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CNOT4O95628 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.54□□□□□ -0.08
CNOT4O95628 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.54□□□□□ -0.08
CNOT4O95628 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.54□□□□□ -0.08
CNOT4O95628 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.54□□□□□ -0.08
CNOT4O95628 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CNOT4O95628 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.54□□□□□ -0.08
CNOT4O95628 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CNOT4O95628 AC093520.2-201ENST00000561830 333 ntBASIC14.54□□□□□ -0.08
CNOT4O95628 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.54□□□□□ -0.08
CNOT4O95628 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.54□□□□□ -0.08
CNOT4O95628 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.54□□□□□ -0.08
CNOT4O95628 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.54□□□□□ -0.08
CNOT4O95628 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.54□□□□□ -0.08
CNOT4O95628 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CNOT4O95628 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CNOT4O95628 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CNOT4O95628 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.54□□□□□ -0.08
CNOT4O95628 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.54□□□□□ -0.08
CNOT4O95628 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNOT4O95628 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.54□□□□□ -0.08
CNOT4O95628 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNOT4O95628 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.54□□□□□ -0.08
CNOT4O95628 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.54□□□□□ -0.08
CNOT4O95628 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNOT4O95628 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CNOT4O95628 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.54□□□□□ -0.08
CNOT4O95628 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
CNOT4O95628 AC005915.1-201ENST00000624912 2018 ntBASIC14.54□□□□□ -0.08
CNOT4O95628 AL031731.1-201ENST00000642131 2094 ntBASIC14.54□□□□□ -0.08
CNOT4O95628 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.54□□□□□ -0.08
CNOT4O95628 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CNOT4O95628 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.54□□□□□ -0.08
CNOT4O95628 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNOT4O95628 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CNOT4O95628 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.54□□□□□ -0.08
CNOT4O95628 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNOT4O95628 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CNOT4O95628 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CNOT4O95628 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CNOT4O95628 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CNOT4O95628 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CNOT4O95628 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CNOT4O95628 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms