Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
LTN1O94822 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LTN1O94822 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC21.22■□□□□ 0.99
LTN1O94822 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LTN1O94822 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LTN1O94822 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC21.22■□□□□ 0.99
LTN1O94822 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LTN1O94822 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LTN1O94822 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC21.22■□□□□ 0.99
LTN1O94822 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LTN1O94822 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC21.22■□□□□ 0.99
LTN1O94822 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LTN1O94822 AC093525.8-201ENST00000624099 1342 ntBASIC21.22■□□□□ 0.99
LTN1O94822 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
LTN1O94822 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LTN1O94822 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LTN1O94822 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LTN1O94822 ACTG1P3-201ENST00000431775 1114 ntBASIC21.22■□□□□ 0.99
LTN1O94822 RPL13AP25-201ENST00000484130 612 ntBASIC21.22■□□□□ 0.99
LTN1O94822 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LTN1O94822 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC21.22■□□□□ 0.99
LTN1O94822 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC21.22■□□□□ 0.99
LTN1O94822 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC21.22■□□□□ 0.99
LTN1O94822 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC21.22■□□□□ 0.99
LTN1O94822 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC21.22■□□□□ 0.99
LTN1O94822 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LTN1O94822 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.22■□□□□ 0.99
LTN1O94822 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LTN1O94822 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
LTN1O94822 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LTN1O94822 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LTN1O94822 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC21.21■□□□□ 0.99
LTN1O94822 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LTN1O94822 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC21.21■□□□□ 0.99
LTN1O94822 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.21■□□□□ 0.99
LTN1O94822 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LTN1O94822 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LTN1O94822 TEX30-203ENST00000376022 828 ntTSL 2 BASIC21.21■□□□□ 0.99
LTN1O94822 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC21.21■□□□□ 0.99
LTN1O94822 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC21.21■□□□□ 0.99
LTN1O94822 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC21.21■□□□□ 0.99
LTN1O94822 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC21.21■□□□□ 0.99
LTN1O94822 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC21.21■□□□□ 0.99
LTN1O94822 AL583810.1-201ENST00000553344 1045 ntBASIC21.21■□□□□ 0.99
LTN1O94822 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC21.21■□□□□ 0.99
LTN1O94822 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC21.21■□□□□ 0.99
LTN1O94822 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LTN1O94822 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC21.21■□□□□ 0.99
LTN1O94822 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LTN1O94822 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC21.21■□□□□ 0.99
LTN1O94822 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
LTN1O94822 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
LTN1O94822 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
LTN1O94822 APOC3-202ENST00000375345 604 ntTSL 5 BASIC21.2■□□□□ 0.99
LTN1O94822 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
LTN1O94822 BCYRN1-201ENST00000418539 200 ntBASIC21.2■□□□□ 0.99
LTN1O94822 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC21.2■□□□□ 0.99
LTN1O94822 RNA5SP412-201ENST00000516234 123 ntBASIC21.2■□□□□ 0.99
LTN1O94822 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC21.2■□□□□ 0.99
LTN1O94822 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTN1O94822 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTN1O94822 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTN1O94822 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC21.2■□□□□ 0.98
LTN1O94822 AL607033.1-201ENST00000623900 1599 ntBASIC21.2■□□□□ 0.98
LTN1O94822 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC21.2■□□□□ 0.98
LTN1O94822 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTN1O94822 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTN1O94822 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTN1O94822 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTN1O94822 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LTN1O94822 C1QBPP1-201ENST00000400117 770 ntBASIC21.2■□□□□ 0.98
LTN1O94822 BCRP2-202ENST00000447763 634 ntBASIC21.2■□□□□ 0.98
LTN1O94822 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
LTN1O94822 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTN1O94822 BCRP6-201ENST00000510112 632 ntBASIC21.2■□□□□ 0.98
LTN1O94822 BCRP7-201ENST00000511549 544 ntBASIC21.2■□□□□ 0.98
LTN1O94822 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTN1O94822 ATF5-205ENST00000600336 682 ntTSL 2 BASIC21.2■□□□□ 0.98
LTN1O94822 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LTN1O94822 REXO1L1P-202ENST00000608646 1974 ntBASIC21.2■□□□□ 0.98
LTN1O94822 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LTN1O94822 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
LTN1O94822 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LTN1O94822 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LTN1O94822 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
LTN1O94822 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTN1O94822 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC21.19■□□□□ 0.98
LTN1O94822 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LTN1O94822 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LTN1O94822 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LTN1O94822 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
LTN1O94822 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LTN1O94822 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC21.19■□□□□ 0.98
LTN1O94822 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LTN1O94822 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LTN1O94822 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LTN1O94822 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LTN1O94822 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LTN1O94822 HAUS4P1-201ENST00000406739 1145 ntBASIC21.19■□□□□ 0.98
LTN1O94822 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms