Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.25□□□□□ -0.13
UPK1BO75841 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.25□□□□□ -0.13
UPK1BO75841 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
UPK1BO75841 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
UPK1BO75841 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
UPK1BO75841 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.25□□□□□ -0.13
UPK1BO75841 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.25□□□□□ -0.13
UPK1BO75841 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.25□□□□□ -0.13
UPK1BO75841 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 KRT8P39-201ENST00000396270 1433 ntBASIC14.24□□□□□ -0.13
UPK1BO75841 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.24□□□□□ -0.13
UPK1BO75841 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.24□□□□□ -0.13
UPK1BO75841 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.24□□□□□ -0.13
UPK1BO75841 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
UPK1BO75841 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.24□□□□□ -0.13
UPK1BO75841 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.24□□□□□ -0.13
UPK1BO75841 FAM197Y1-201ENST00000421178 764 ntBASIC14.24□□□□□ -0.13
UPK1BO75841 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.24□□□□□ -0.13
UPK1BO75841 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.24□□□□□ -0.13
UPK1BO75841 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.24□□□□□ -0.13
UPK1BO75841 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.24□□□□□ -0.13
UPK1BO75841 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.24□□□□□ -0.13
UPK1BO75841 AC005332.3-201ENST00000589904 676 ntBASIC14.24□□□□□ -0.13
UPK1BO75841 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.24□□□□□ -0.13
UPK1BO75841 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
UPK1BO75841 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.24□□□□□ -0.13
UPK1BO75841 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
UPK1BO75841 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UPK1BO75841 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.24□□□□□ -0.13
UPK1BO75841 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.24□□□□□ -0.13
UPK1BO75841 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 AL928921.2-201ENST00000641325 2442 ntBASIC14.24□□□□□ -0.13
UPK1BO75841 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.24□□□□□ -0.13
UPK1BO75841 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
UPK1BO75841 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
UPK1BO75841 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1BO75841 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.24□□□□□ -0.13
UPK1BO75841 PTENP1-202ENST00000532280 3996 ntBASIC14.24□□□□□ -0.13
UPK1BO75841 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
UPK1BO75841 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
UPK1BO75841 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.23□□□□□ -0.13
UPK1BO75841 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
UPK1BO75841 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.23□□□□□ -0.13
UPK1BO75841 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UPK1BO75841 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
UPK1BO75841 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
UPK1BO75841 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.23□□□□□ -0.13
UPK1BO75841 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
UPK1BO75841 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
UPK1BO75841 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK1BO75841 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UPK1BO75841 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.23□□□□□ -0.13
UPK1BO75841 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
UPK1BO75841 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.23□□□□□ -0.13
UPK1BO75841 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.23□□□□□ -0.13
UPK1BO75841 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms