Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.04■□□□□ 0.48
LGR5O75473 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.04■□□□□ 0.48
LGR5O75473 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.04■□□□□ 0.48
LGR5O75473 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LGR5O75473 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LGR5O75473 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.04■□□□□ 0.48
LGR5O75473 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.04■□□□□ 0.48
LGR5O75473 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LGR5O75473 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LGR5O75473 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.04■□□□□ 0.48
LGR5O75473 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LGR5O75473 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LGR5O75473 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LGR5O75473 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LGR5O75473 CYP4F24P-201ENST00000586049 1580 ntBASIC18.04■□□□□ 0.48
LGR5O75473 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
LGR5O75473 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.03■□□□□ 0.48
LGR5O75473 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.03■□□□□ 0.48
LGR5O75473 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LGR5O75473 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LGR5O75473 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LGR5O75473 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LGR5O75473 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.03■□□□□ 0.48
LGR5O75473 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.03■□□□□ 0.48
LGR5O75473 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LGR5O75473 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LGR5O75473 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LGR5O75473 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.03■□□□□ 0.48
LGR5O75473 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LGR5O75473 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LGR5O75473 FLJ38576-201ENST00000623820 2459 ntBASIC18.03■□□□□ 0.48
LGR5O75473 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.03■□□□□ 0.48
LGR5O75473 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LGR5O75473 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LGR5O75473 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.03■□□□□ 0.48
LGR5O75473 AC245100.5-201ENST00000452108 331 ntBASIC18.03■□□□□ 0.48
LGR5O75473 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LGR5O75473 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.03■□□□□ 0.48
LGR5O75473 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.03■□□□□ 0.48
LGR5O75473 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LGR5O75473 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.03■□□□□ 0.48
LGR5O75473 API5-211ENST00000534695 560 ntTSL 5 BASIC18.03■□□□□ 0.48
LGR5O75473 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LGR5O75473 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LGR5O75473 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.03■□□□□ 0.48
LGR5O75473 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.03■□□□□ 0.48
LGR5O75473 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.03■□□□□ 0.48
LGR5O75473 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.03■□□□□ 0.48
LGR5O75473 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.03■□□□□ 0.48
LGR5O75473 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
LGR5O75473 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.03■□□□□ 0.48
LGR5O75473 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LGR5O75473 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.03■□□□□ 0.48
LGR5O75473 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
LGR5O75473 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LGR5O75473 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.03■□□□□ 0.48
LGR5O75473 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LGR5O75473 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.02■□□□□ 0.48
LGR5O75473 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
LGR5O75473 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LGR5O75473 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.02■□□□□ 0.48
LGR5O75473 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.02■□□□□ 0.48
LGR5O75473 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.02■□□□□ 0.48
LGR5O75473 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LGR5O75473 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LGR5O75473 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LGR5O75473 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LGR5O75473 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LGR5O75473 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LGR5O75473 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
LGR5O75473 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.02■□□□□ 0.48
LGR5O75473 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LGR5O75473 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.02■□□□□ 0.48
LGR5O75473 HIST3H2BA-201ENST00000436555 524 ntBASIC18.02■□□□□ 0.48
LGR5O75473 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.02■□□□□ 0.48
LGR5O75473 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.02■□□□□ 0.48
LGR5O75473 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.02■□□□□ 0.48
LGR5O75473 AC140912.1-201ENST00000577171 1054 ntBASIC18.02■□□□□ 0.48
LGR5O75473 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LGR5O75473 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LGR5O75473 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.02■□□□□ 0.48
LGR5O75473 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.02■□□□□ 0.48
LGR5O75473 AC004790.1-201ENST00000612686 536 ntBASIC18.02■□□□□ 0.48
LGR5O75473 MIR6069-201ENST00000620069 79 ntBASIC18.02■□□□□ 0.48
LGR5O75473 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
LGR5O75473 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LGR5O75473 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LGR5O75473 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.02■□□□□ 0.47
LGR5O75473 AGGF1P2-201ENST00000426656 2106 ntBASIC18.02■□□□□ 0.47
LGR5O75473 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LGR5O75473 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
LGR5O75473 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LGR5O75473 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
LGR5O75473 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
LGR5O75473 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LGR5O75473 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.02■□□□□ 0.47
LGR5O75473 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.02■□□□□ 0.47
LGR5O75473 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LGR5O75473 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LGR5O75473 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms