Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 U82695.1-201ENST00000635752 1889 ntBASIC16.54■□□□□ 0.24
CDH16O75309 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH16O75309 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDH16O75309 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH16O75309 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDH16O75309 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
CDH16O75309 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 NUS1P2-201ENST00000417358 873 ntBASIC16.54■□□□□ 0.24
CDH16O75309 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 AC106795.1-205ENST00000512851 1056 ntBASIC16.54■□□□□ 0.24
CDH16O75309 AC107918.2-201ENST00000530817 355 ntBASIC16.54■□□□□ 0.24
CDH16O75309 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH16O75309 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.54■□□□□ 0.24
CDH16O75309 AC005412.3-201ENST00000580309 715 ntBASIC16.54■□□□□ 0.24
CDH16O75309 NKAPP1-205ENST00000585790 367 ntBASIC16.54■□□□□ 0.24
CDH16O75309 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH16O75309 AC099336.1-202ENST00000602961 463 ntBASIC16.54■□□□□ 0.24
CDH16O75309 NPAP1P7-201ENST00000613027 823 ntBASIC16.54■□□□□ 0.24
CDH16O75309 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.54■□□□□ 0.24
CDH16O75309 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDH16O75309 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH16O75309 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH16O75309 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH16O75309 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH16O75309 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH16O75309 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH16O75309 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH16O75309 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH16O75309 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDH16O75309 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDH16O75309 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CDH16O75309 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH16O75309 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH16O75309 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CDH16O75309 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDH16O75309 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDH16O75309 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.53■□□□□ 0.24
CDH16O75309 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH16O75309 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH16O75309 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.53■□□□□ 0.24
CDH16O75309 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH16O75309 AC139887.3-201ENST00000568585 713 ntBASIC16.53■□□□□ 0.24
CDH16O75309 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDH16O75309 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH16O75309 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH16O75309 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CDH16O75309 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH16O75309 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH16O75309 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH16O75309 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH16O75309 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH16O75309 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH16O75309 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH16O75309 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms