Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 HAUS4P1-201ENST00000406739 1145 ntBASIC16.5■□□□□ 0.23
PRAMEF11O60813 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 BANF1P1-201ENST00000553684 263 ntBASIC16.5■□□□□ 0.23
PRAMEF11O60813 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF11O60813 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEF11O60813 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.49■□□□□ 0.23
PRAMEF11O60813 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 AC105021.1-202ENST00000570572 669 ntBASIC16.49■□□□□ 0.23
PRAMEF11O60813 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 AC026979.3-201ENST00000607315 403 ntBASIC16.49■□□□□ 0.23
PRAMEF11O60813 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF11O60813 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRAMEF11O60813 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF11O60813 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF11O60813 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF11O60813 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms