Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC3O60481 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.64□□□□□ -0.07
ZIC3O60481 AC026979.3-201ENST00000607315 403 ntBASIC14.64□□□□□ -0.07
ZIC3O60481 AL138828.2-201ENST00000615812 383 ntBASIC14.64□□□□□ -0.07
ZIC3O60481 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC3O60481 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC3O60481 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC3O60481 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC3O60481 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.64□□□□□ -0.07
ZIC3O60481 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.64□□□□□ -0.07
ZIC3O60481 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.64□□□□□ -0.07
ZIC3O60481 AC006449.5-201ENST00000610658 2098 ntBASIC14.64□□□□□ -0.07
ZIC3O60481 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC3O60481 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
ZIC3O60481 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC3O60481 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ZIC3O60481 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ZIC3O60481 PCDH8P1-201ENST00000428983 2773 ntBASIC14.63□□□□□ -0.07
ZIC3O60481 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ZIC3O60481 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ZIC3O60481 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.63□□□□□ -0.07
ZIC3O60481 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
ZIC3O60481 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ZIC3O60481 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.63□□□□□ -0.07
ZIC3O60481 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ZIC3O60481 HMGN1P19-201ENST00000436976 333 ntBASIC14.63□□□□□ -0.07
ZIC3O60481 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.63□□□□□ -0.07
ZIC3O60481 AC245100.5-201ENST00000452108 331 ntBASIC14.63□□□□□ -0.07
ZIC3O60481 HLA-V-204ENST00000476601 1289 ntBASIC14.63□□□□□ -0.07
ZIC3O60481 AC027369.6-201ENST00000525520 931 ntBASIC14.63□□□□□ -0.07
ZIC3O60481 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.63□□□□□ -0.07
ZIC3O60481 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.63□□□□□ -0.07
ZIC3O60481 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.63□□□□□ -0.07
ZIC3O60481 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.63□□□□□ -0.07
ZIC3O60481 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ZIC3O60481 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.63□□□□□ -0.07
ZIC3O60481 AC099398.1-201ENST00000567919 2776 ntBASIC14.63□□□□□ -0.07
ZIC3O60481 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.63□□□□□ -0.07
ZIC3O60481 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ZIC3O60481 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.63□□□□□ -0.07
ZIC3O60481 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.63□□□□□ -0.07
ZIC3O60481 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC3O60481 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC3O60481 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC3O60481 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ZIC3O60481 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.62□□□□□ -0.07
ZIC3O60481 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC3O60481 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
ZIC3O60481 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC3O60481 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC3O60481 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC3O60481 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC3O60481 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.62□□□□□ -0.07
ZIC3O60481 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC3O60481 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC3O60481 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.62□□□□□ -0.07
ZIC3O60481 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.62□□□□□ -0.07
ZIC3O60481 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC3O60481 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC3O60481 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.62□□□□□ -0.07
ZIC3O60481 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.62□□□□□ -0.07
ZIC3O60481 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC3O60481 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.62□□□□□ -0.07
ZIC3O60481 RPL37AP1-201ENST00000412502 279 ntBASIC14.62□□□□□ -0.07
ZIC3O60481 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.62□□□□□ -0.07
ZIC3O60481 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.62□□□□□ -0.07
ZIC3O60481 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.62□□□□□ -0.07
ZIC3O60481 AL136982.4-201ENST00000437689 1740 ntBASIC14.62□□□□□ -0.07
ZIC3O60481 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.62□□□□□ -0.07
ZIC3O60481 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.62□□□□□ -0.07
ZIC3O60481 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.62□□□□□ -0.07
ZIC3O60481 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.62□□□□□ -0.07
ZIC3O60481 AL079307.3-201ENST00000556114 283 ntBASIC14.62□□□□□ -0.07
ZIC3O60481 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.62□□□□□ -0.07
ZIC3O60481 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.62□□□□□ -0.07
ZIC3O60481 AL691432.1-201ENST00000596308 1422 ntBASIC14.62□□□□□ -0.07
ZIC3O60481 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.62□□□□□ -0.07
ZIC3O60481 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms