Protein–RNA interactions for Protein: O15554

KCNN4, Intermediate conductance calcium-activated potassium channel protein 4, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4O15554 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KCNN4O15554 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 AC092919.2-201ENST00000623631 1645 ntBASIC16.82■□□□□ 0.28
KCNN4O15554 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.82■□□□□ 0.28
KCNN4O15554 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNN4O15554 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KCNN4O15554 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNN4O15554 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNN4O15554 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.82■□□□□ 0.28
KCNN4O15554 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.82■□□□□ 0.28
KCNN4O15554 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.82■□□□□ 0.28
KCNN4O15554 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.82■□□□□ 0.28
KCNN4O15554 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNN4O15554 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.82■□□□□ 0.28
KCNN4O15554 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNN4O15554 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNN4O15554 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNN4O15554 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNN4O15554 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.81■□□□□ 0.28
KCNN4O15554 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNN4O15554 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
KCNN4O15554 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.81■□□□□ 0.28
KCNN4O15554 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
KCNN4O15554 MIR648-201ENST00000385046 94 ntBASIC16.81■□□□□ 0.28
KCNN4O15554 AC092474.2-201ENST00000424288 719 ntBASIC16.81■□□□□ 0.28
KCNN4O15554 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 AC140658.5-201ENST00000438532 169 ntBASIC16.81■□□□□ 0.28
KCNN4O15554 KRT18P2-201ENST00000447938 1258 ntBASIC16.81■□□□□ 0.28
KCNN4O15554 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 RPL13AP23-201ENST00000480739 586 ntBASIC16.81■□□□□ 0.28
KCNN4O15554 KRT18P34-201ENST00000488218 1270 ntBASIC16.81■□□□□ 0.28
KCNN4O15554 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.81■□□□□ 0.28
KCNN4O15554 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.81■□□□□ 0.28
KCNN4O15554 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNN4O15554 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.81■□□□□ 0.28
KCNN4O15554 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.81■□□□□ 0.28
KCNN4O15554 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNN4O15554 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KCNN4O15554 AC016027.1-202ENST00000607927 1699 ntBASIC16.81■□□□□ 0.28
KCNN4O15554 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNN4O15554 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.81■□□□□ 0.28
KCNN4O15554 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
KCNN4O15554 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNN4O15554 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNN4O15554 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KCNN4O15554 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
KCNN4O15554 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.8■□□□□ 0.28
KCNN4O15554 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
KCNN4O15554 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNN4O15554 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNN4O15554 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.8■□□□□ 0.28
KCNN4O15554 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNN4O15554 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KCNN4O15554 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KCNN4O15554 IL9RP2-201ENST00000423948 1312 ntBASIC16.8■□□□□ 0.28
KCNN4O15554 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.8■□□□□ 0.28
KCNN4O15554 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNN4O15554 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNN4O15554 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNN4O15554 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.8■□□□□ 0.28
KCNN4O15554 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.8■□□□□ 0.28
KCNN4O15554 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNN4O15554 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNN4O15554 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KCNN4O15554 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KCNN4O15554 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KCNN4O15554 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms