Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCL21O00585 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CCL21O00585 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL21O00585 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.28□□□□□ -0.12
CCL21O00585 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCL21O00585 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCL21O00585 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.28□□□□□ -0.12
CCL21O00585 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.28□□□□□ -0.12
CCL21O00585 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CCL21O00585 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.28□□□□□ -0.12
CCL21O00585 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL21O00585 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.28□□□□□ -0.12
CCL21O00585 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL21O00585 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.28□□□□□ -0.12
CCL21O00585 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL21O00585 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL21O00585 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.28□□□□□ -0.12
CCL21O00585 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
CCL21O00585 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.28□□□□□ -0.12
CCL21O00585 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCL21O00585 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL21O00585 NEFHP1-201ENST00000412845 2629 ntBASIC14.28□□□□□ -0.12
CCL21O00585 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL21O00585 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CCL21O00585 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCL21O00585 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL21O00585 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL21O00585 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL21O00585 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CCL21O00585 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.27□□□□□ -0.12
CCL21O00585 PCGF3-213ENST00000620529 1899 ntBASIC14.27□□□□□ -0.12
CCL21O00585 AL136982.4-201ENST00000437689 1740 ntBASIC14.27□□□□□ -0.12
CCL21O00585 AC005622.1-201ENST00000636801 1703 ntBASIC14.27□□□□□ -0.12
CCL21O00585 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.27□□□□□ -0.12
CCL21O00585 CYP4F24P-201ENST00000586049 1580 ntBASIC14.27□□□□□ -0.12
CCL21O00585 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CCL21O00585 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL21O00585 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL21O00585 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCL21O00585 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL21O00585 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.27□□□□□ -0.12
CCL21O00585 AC018665.1-201ENST00000622927 1362 ntBASIC14.27□□□□□ -0.12
CCL21O00585 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL21O00585 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL21O00585 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL21O00585 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL21O00585 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL21O00585 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL21O00585 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL21O00585 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL21O00585 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CCL21O00585 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CCL21O00585 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL21O00585 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL21O00585 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
CCL21O00585 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.27□□□□□ -0.13
CCL21O00585 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CCL21O00585 RN7SL399P-201ENST00000471648 279 ntBASIC14.27□□□□□ -0.13
CCL21O00585 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL21O00585 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.27□□□□□ -0.13
CCL21O00585 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.27□□□□□ -0.13
CCL21O00585 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.27□□□□□ -0.13
CCL21O00585 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.27□□□□□ -0.13
CCL21O00585 AC036164.1-201ENST00000570544 333 ntBASIC14.27□□□□□ -0.13
CCL21O00585 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL21O00585 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.27□□□□□ -0.13
CCL21O00585 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.27□□□□□ -0.13
CCL21O00585 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CCL21O00585 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL21O00585 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CCL21O00585 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CCL21O00585 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL21O00585 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL21O00585 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL21O00585 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL21O00585 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL21O00585 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL21O00585 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL21O00585 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms