Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.53■□□□□ 0.24
AP3B1O00203 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.53■□□□□ 0.24
AP3B1O00203 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.53■□□□□ 0.24
AP3B1O00203 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
AP3B1O00203 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.53■□□□□ 0.24
AP3B1O00203 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.53■□□□□ 0.24
AP3B1O00203 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 LINC02199-201ENST00000506655 2702 ntBASIC16.53■□□□□ 0.24
AP3B1O00203 WASH6P-202ENST00000359512 1437 ntBASIC16.53■□□□□ 0.24
AP3B1O00203 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
AP3B1O00203 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.53■□□□□ 0.24
AP3B1O00203 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.52■□□□□ 0.24
AP3B1O00203 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3B1O00203 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3B1O00203 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3B1O00203 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
AP3B1O00203 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3B1O00203 ZNF259P1-201ENST00000407656 1365 ntBASIC16.52■□□□□ 0.24
AP3B1O00203 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.52■□□□□ 0.24
AP3B1O00203 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP3B1O00203 AC112504.1-201ENST00000623415 1841 ntBASIC16.52■□□□□ 0.24
AP3B1O00203 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
AP3B1O00203 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.52■□□□□ 0.24
AP3B1O00203 AL596257.1-201ENST00000641463 2694 ntBASIC16.52■□□□□ 0.24
AP3B1O00203 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3B1O00203 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3B1O00203 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.52■□□□□ 0.24
AP3B1O00203 HAUS4P1-201ENST00000406739 1145 ntBASIC16.52■□□□□ 0.24
AP3B1O00203 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.52■□□□□ 0.24
AP3B1O00203 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.52■□□□□ 0.24
AP3B1O00203 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.52■□□□□ 0.24
AP3B1O00203 AC009078.2-202ENST00000463353 338 ntBASIC16.52■□□□□ 0.24
AP3B1O00203 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
AP3B1O00203 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3B1O00203 KRT19P2-202ENST00000557173 1012 ntBASIC16.52■□□□□ 0.24
AP3B1O00203 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
AP3B1O00203 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.52■□□□□ 0.24
AP3B1O00203 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.52■□□□□ 0.24
AP3B1O00203 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.52■□□□□ 0.24
AP3B1O00203 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
AP3B1O00203 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.52■□□□□ 0.23
AP3B1O00203 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
AP3B1O00203 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.52■□□□□ 0.23
AP3B1O00203 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
AP3B1O00203 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP3B1O00203 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.52■□□□□ 0.23
AP3B1O00203 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP3B1O00203 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP3B1O00203 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP3B1O00203 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP3B1O00203 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP3B1O00203 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.51■□□□□ 0.23
AP3B1O00203 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.51■□□□□ 0.23
AP3B1O00203 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
AP3B1O00203 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
AP3B1O00203 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
AP3B1O00203 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
AP3B1O00203 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.51■□□□□ 0.23
AP3B1O00203 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
AP3B1O00203 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.51■□□□□ 0.23
AP3B1O00203 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
AP3B1O00203 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.51■□□□□ 0.23
AP3B1O00203 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
AP3B1O00203 PMS2P7-201ENST00000506558 1336 ntBASIC16.51■□□□□ 0.23
AP3B1O00203 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.51■□□□□ 0.23
AP3B1O00203 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
AP3B1O00203 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.51■□□□□ 0.23
AP3B1O00203 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
AP3B1O00203 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
AP3B1O00203 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 AL591424.1-201ENST00000442569 1213 ntBASIC16.51■□□□□ 0.23
AP3B1O00203 RPL13AP23-201ENST00000480739 586 ntBASIC16.51■□□□□ 0.23
AP3B1O00203 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
AP3B1O00203 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
AP3B1O00203 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.51■□□□□ 0.23
AP3B1O00203 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.51■□□□□ 0.23
AP3B1O00203 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.51■□□□□ 0.23
AP3B1O00203 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.51■□□□□ 0.23
AP3B1O00203 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.51■□□□□ 0.23
AP3B1O00203 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.51■□□□□ 0.23
AP3B1O00203 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.51■□□□□ 0.23
AP3B1O00203 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms