Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 MYO15B-237ENST00000642007 4893 ntBASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 SSR4P1-203ENST00000599569 2260 ntBASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 GPAA1P2-202ENST00000606848 1787 ntBASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 SBF1P1-201ENST00000444527 5631 ntBASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 RCN1P2-201ENST00000398357 915 ntBASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 MINOS1P3-201ENST00000457048 203 ntBASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MEIS3P1A6NDR6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 POU5F1P6-201ENST00000466990 990 ntBASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 NTF6B-201ENST00000591913 560 ntBASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.06□□□□□ -0.16
MEIS3P1A6NDR6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
MEIS3P1A6NDR6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
MEIS3P1A6NDR6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.05□□□□□ -0.16
MEIS3P1A6NDR6 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MEIS3P1A6NDR6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MEIS3P1A6NDR6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.05□□□□□ -0.16
MEIS3P1A6NDR6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MEIS3P1A6NDR6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.05□□□□□ -0.16
MEIS3P1A6NDR6 AC097376.2-205ENST00000610159 5334 ntBASIC14.05□□□□□ -0.16
MEIS3P1A6NDR6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.05□□□□□ -0.16
MEIS3P1A6NDR6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
MEIS3P1A6NDR6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MEIS3P1A6NDR6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.05□□□□□ -0.16
MEIS3P1A6NDR6 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
MEIS3P1A6NDR6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms