Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 PRAL-201ENST00000624952 3286 ntBASIC16.61■□□□□ 0.25
CCDC78A2IDD5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 KRT19P2-202ENST00000557173 1012 ntBASIC16.61■□□□□ 0.25
CCDC78A2IDD5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 AC140113.2-201ENST00000604370 208 ntBASIC16.61■□□□□ 0.25
CCDC78A2IDD5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC78A2IDD5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 LINC01144-201ENST00000626198 1710 ntBASIC16.6■□□□□ 0.25
CCDC78A2IDD5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 AC007064.4-201ENST00000637740 555 ntBASIC16.6■□□□□ 0.25
CCDC78A2IDD5 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC78A2IDD5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 AC024909.3-201ENST00000611513 2257 ntBASIC16.59■□□□□ 0.25
CCDC78A2IDD5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.59■□□□□ 0.25
CCDC78A2IDD5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 AC005622.1-201ENST00000636801 1703 ntBASIC16.59■□□□□ 0.25
CCDC78A2IDD5 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 MED15P5-201ENST00000423150 992 ntBASIC16.59■□□□□ 0.25
CCDC78A2IDD5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.59■□□□□ 0.25
CCDC78A2IDD5 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms