Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AP001282.1-201ENST00000531301 1499 ntBASIC15.27■□□□□ 0.03
TRBV5-3A0A0A0MS03 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV5-3A0A0A0MS03 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 AC090616.6-203ENST00000579186 1945 ntBASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 RPS2P28-201ENST00000314255 741 ntBASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 HCG4B-203ENST00000450128 991 ntBASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 KRT18P34-201ENST00000488218 1270 ntBASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 AP003680.1-201ENST00000598970 3660 ntBASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV5-3A0A0A0MS03 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 GPX1P2-201ENST00000429271 606 ntBASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 AL049840.3-201ENST00000602669 611 ntBASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 AC010507.1-201ENST00000633895 436 ntBASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 AC138035.3-201ENST00000622706 2791 ntBASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV5-3A0A0A0MS03 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms