Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AL512343.1-201ENST00000605837 169 ntBASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 AC011270.2-201ENST00000624293 2550 ntBASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 FO393414.2-201ENST00000405153 598 ntBASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 AC098850.1-201ENST00000419919 790 ntBASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 WFDC1-204ENST00000613603 549 ntBASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC187A0A096LP49 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 AP005482.1-201ENST00000563722 1273 ntBASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 AC025048.3-201ENST00000590609 569 ntBASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 AC015936.2-201ENST00000593177 259 ntBASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 AL365330.1-201ENST00000607459 531 ntBASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 AC005702.4-201ENST00000618393 416 ntBASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms