Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC109322.1-201ENST00000524499 1264 ntBASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 AC084121.4-201ENST00000641598 221 ntBASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 AF228730.8-201ENST00000642140 221 ntBASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 AC006449.5-201ENST00000610658 2098 ntBASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 KRT18P32-201ENST00000424695 1287 ntBASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 AC098859.1-201ENST00000502915 1238 ntBASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 AC025678.2-201ENST00000562061 970 ntBASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.52■□□□□ 0.24
RAI2Q9Y5P3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAI2Q9Y5P3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 AL592424.1-201ENST00000563624 1536 ntBASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms