Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 AC026748.1-201ENST00000624349 3251 ntBASIC15.51■□□□□ 0.07
AP4S1Q9Y587 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 ATP5G1P1-201ENST00000448724 379 ntBASIC15.51■□□□□ 0.07
AP4S1Q9Y587 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 AC112907.2-201ENST00000448639 330 ntBASIC15.5■□□□□ 0.07
AP4S1Q9Y587 KRT18P38-201ENST00000449496 1282 ntBASIC15.5■□□□□ 0.07
AP4S1Q9Y587 YBX1P2-201ENST00000489612 999 ntBASIC15.5■□□□□ 0.07
AP4S1Q9Y587 AC090616.6-201ENST00000582640 721 ntBASIC15.5■□□□□ 0.07
AP4S1Q9Y587 AC139887.4-201ENST00000607877 719 ntBASIC15.5■□□□□ 0.07
AP4S1Q9Y587 IGHV3-41-201ENST00000613121 348 ntBASIC15.5■□□□□ 0.07
AP4S1Q9Y587 HYMAI.1-201ENST00000620949 238 ntBASIC15.5■□□□□ 0.07
AP4S1Q9Y587 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 AC087481.3-201ENST00000602886 1894 ntBASIC15.5■□□□□ 0.07
AP4S1Q9Y587 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 AC007292.2-201ENST00000593524 1812 ntBASIC15.5■□□□□ 0.07
AP4S1Q9Y587 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4S1Q9Y587 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 AL590787.1-201ENST00000568856 1315 ntBASIC15.49■□□□□ 0.07
AP4S1Q9Y587 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 TSPY22P-201ENST00000427496 604 ntBASIC15.49■□□□□ 0.07
AP4S1Q9Y587 AC246785.2-201ENST00000432512 513 ntBASIC15.49■□□□□ 0.07
AP4S1Q9Y587 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.49■□□□□ 0.07
AP4S1Q9Y587 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms