Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HPS5Q9UPZ3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
HPS5Q9UPZ3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
HPS5Q9UPZ3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.39■□□□□ 0.7
HPS5Q9UPZ3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HPS5Q9UPZ3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
HPS5Q9UPZ3 PCGF3-213ENST00000620529 1899 ntBASIC19.39■□□□□ 0.7
HPS5Q9UPZ3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
HPS5Q9UPZ3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 MIR4259-201ENST00000584466 101 ntBASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 TMEM261P1-201ENST00000604899 340 ntBASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 SPDYE12P-201ENST00000618416 771 ntBASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS5Q9UPZ3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HPS5Q9UPZ3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 AC021097.1-201ENST00000607902 574 ntBASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 AL138828.2-201ENST00000615812 383 ntBASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPS5Q9UPZ3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms