Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AL035456.1-201ENST00000456064 1369 ntBASIC15.56■□□□□ 0.08
LHX6Q9UPM6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 OR6D1P-203ENST00000641209 4860 ntBASIC15.55■□□□□ 0.08
LHX6Q9UPM6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 AP3S2-216ENST00000617003 1561 ntBASIC15.55■□□□□ 0.08
LHX6Q9UPM6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 MTND6P24-201ENST00000440466 518 ntBASIC15.55■□□□□ 0.08
LHX6Q9UPM6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LHX6Q9UPM6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 MIR1247-201ENST00000408206 136 ntBASIC15.54■□□□□ 0.08
LHX6Q9UPM6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 SLC25A24P2-201ENST00000415059 510 ntBASIC15.54■□□□□ 0.08
LHX6Q9UPM6 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 MTND2P3-201ENST00000452458 470 ntBASIC15.54■□□□□ 0.08
LHX6Q9UPM6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 AC079328.1-201ENST00000560358 952 ntBASIC15.54■□□□□ 0.08
LHX6Q9UPM6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.54■□□□□ 0.08
LHX6Q9UPM6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms