Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL20A1Q9P218 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL20A1Q9P218 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL20A1Q9P218 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.33■□□□□ 0.52
COL20A1Q9P218 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.33■□□□□ 0.52
COL20A1Q9P218 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.33■□□□□ 0.52
COL20A1Q9P218 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.33■□□□□ 0.52
COL20A1Q9P218 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL20A1Q9P218 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 SDHAP3-202ENST00000515467 728 ntBASIC18.32■□□□□ 0.52
COL20A1Q9P218 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 CHCHD2P3-201ENST00000603038 451 ntBASIC18.32■□□□□ 0.52
COL20A1Q9P218 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 AC079328.2-201ENST00000561241 3354 ntBASIC18.32■□□□□ 0.52
COL20A1Q9P218 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL20A1Q9P218 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COL20A1Q9P218 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 LTB4R2-202ENST00000528054 3092 ntBASIC18.31■□□□□ 0.52
COL20A1Q9P218 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 AZGP1P1-201ENST00000411909 902 ntBASIC18.31■□□□□ 0.52
COL20A1Q9P218 EEF1DP4-201ENST00000446006 880 ntBASIC18.31■□□□□ 0.52
COL20A1Q9P218 AC245100.5-201ENST00000452108 331 ntBASIC18.31■□□□□ 0.52
COL20A1Q9P218 RN7SL692P-201ENST00000464677 288 ntBASIC18.31■□□□□ 0.52
COL20A1Q9P218 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 TP53TG3HP-202ENST00000569755 579 ntBASIC18.31■□□□□ 0.52
COL20A1Q9P218 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
COL20A1Q9P218 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL20A1Q9P218 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms