Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 LINC00982-205ENST00000420957 435 ntBASIC15.9■□□□□ 0.14
NDE1Q9NXR1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 IGHV3-41-201ENST00000613121 348 ntBASIC15.9■□□□□ 0.14
NDE1Q9NXR1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDE1Q9NXR1 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.89■□□□□ 0.14
NDE1Q9NXR1 AC106881.1-201ENST00000605849 3329 ntBASIC15.89■□□□□ 0.13
NDE1Q9NXR1 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 AC005089.1-201ENST00000619486 2241 ntBASIC15.89■□□□□ 0.13
NDE1Q9NXR1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 TSPY22P-201ENST00000427496 604 ntBASIC15.89■□□□□ 0.13
NDE1Q9NXR1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 AC139887.4-201ENST00000607877 719 ntBASIC15.89■□□□□ 0.13
NDE1Q9NXR1 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 AC148477.5-201ENST00000625164 1645 ntBASIC15.89■□□□□ 0.13
NDE1Q9NXR1 MYO15B-237ENST00000642007 4893 ntBASIC15.89■□□□□ 0.13
NDE1Q9NXR1 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NDE1Q9NXR1 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.88■□□□□ 0.13
NDE1Q9NXR1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 TMBIM7P-203ENST00000641617 1718 ntBASIC15.88■□□□□ 0.13
NDE1Q9NXR1 AL109954.1-202ENST00000564051 2148 ntBASIC15.88■□□□□ 0.13
NDE1Q9NXR1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.88■□□□□ 0.13
NDE1Q9NXR1 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms