Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CISHQ9NSE2 AP3S2-216ENST00000617003 1561 ntBASIC17.4■□□□□ 0.38
CISHQ9NSE2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.4■□□□□ 0.38
CISHQ9NSE2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.4■□□□□ 0.38
CISHQ9NSE2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CISHQ9NSE2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
CISHQ9NSE2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CISHQ9NSE2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CISHQ9NSE2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CISHQ9NSE2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CISHQ9NSE2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
CISHQ9NSE2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CISHQ9NSE2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CISHQ9NSE2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CISHQ9NSE2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CISHQ9NSE2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CISHQ9NSE2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CISHQ9NSE2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CISHQ9NSE2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CISHQ9NSE2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CISHQ9NSE2 HLA-H-201ENST00000383620 1096 ntBASIC17.39■□□□□ 0.37
CISHQ9NSE2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 RNA5SP410-201ENST00000516285 106 ntBASIC17.39■□□□□ 0.37
CISHQ9NSE2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 AP001160.2-201ENST00000596071 487 ntBASIC17.39■□□□□ 0.37
CISHQ9NSE2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CISHQ9NSE2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CISHQ9NSE2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CISHQ9NSE2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CISHQ9NSE2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 AL513523.2-202ENST00000427283 2040 ntBASIC17.38■□□□□ 0.37
CISHQ9NSE2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 RBPMS2P1-201ENST00000437762 623 ntBASIC17.38■□□□□ 0.37
CISHQ9NSE2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 ALG1L8P-201ENST00000533887 760 ntBASIC17.38■□□□□ 0.37
CISHQ9NSE2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 AC024267.1-201ENST00000582320 895 ntBASIC17.38■□□□□ 0.37
CISHQ9NSE2 AC006538.3-201ENST00000612495 578 ntBASIC17.38■□□□□ 0.37
CISHQ9NSE2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CISHQ9NSE2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.38■□□□□ 0.37
CISHQ9NSE2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.37■□□□□ 0.37
CISHQ9NSE2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CISHQ9NSE2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms