Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 AC005622.1-201ENST00000636801 1703 ntBASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 TREML5P-201ENST00000421694 576 ntBASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 POU5F1P6-201ENST00000466990 990 ntBASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 AL589702.1-201ENST00000641229 1509 ntBASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A4Q9HBG4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 RNA5SP410-201ENST00000516285 106 ntBASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A4Q9HBG4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ATP6V0A4Q9HBG4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
ATP6V0A4Q9HBG4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.5
ATP6V0A4Q9HBG4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ATP6V0A4Q9HBG4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A4Q9HBG4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A4Q9HBG4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP6V0A4Q9HBG4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A4Q9HBG4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
ATP6V0A4Q9HBG4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP6V0A4Q9HBG4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A4Q9HBG4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A4Q9HBG4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ATP6V0A4Q9HBG4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
ATP6V0A4Q9HBG4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP6V0A4Q9HBG4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.14■□□□□ 0.49
ATP6V0A4Q9HBG4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A4Q9HBG4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.14■□□□□ 0.49
ATP6V0A4Q9HBG4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.14■□□□□ 0.49
ATP6V0A4Q9HBG4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.14■□□□□ 0.49
ATP6V0A4Q9HBG4 AC018529.1-201ENST00000613063 361 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms