Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
SH2D4AQ9H788 AL118508.1-201ENST00000613502 2345 ntBASIC18.98■□□□□ 0.63
SH2D4AQ9H788 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.98■□□□□ 0.63
SH2D4AQ9H788 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.98■□□□□ 0.63
SH2D4AQ9H788 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SH2D4AQ9H788 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SH2D4AQ9H788 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SH2D4AQ9H788 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SH2D4AQ9H788 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.98■□□□□ 0.63
SH2D4AQ9H788 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SH2D4AQ9H788 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SH2D4AQ9H788 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SH2D4AQ9H788 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SH2D4AQ9H788 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SH2D4AQ9H788 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.98■□□□□ 0.63
SH2D4AQ9H788 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SH2D4AQ9H788 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SH2D4AQ9H788 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SH2D4AQ9H788 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 AC005622.1-201ENST00000636801 1703 ntBASIC18.97■□□□□ 0.63
SH2D4AQ9H788 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 AC135586.1-201ENST00000539323 574 ntBASIC18.97■□□□□ 0.63
SH2D4AQ9H788 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SH2D4AQ9H788 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SH2D4AQ9H788 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
SH2D4AQ9H788 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SH2D4AQ9H788 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SH2D4AQ9H788 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SH2D4AQ9H788 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SH2D4AQ9H788 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SH2D4AQ9H788 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SH2D4AQ9H788 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.96■□□□□ 0.63
SH2D4AQ9H788 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SH2D4AQ9H788 AC010336.2-201ENST00000564226 506 ntBASIC18.96■□□□□ 0.63
SH2D4AQ9H788 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SH2D4AQ9H788 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SH2D4AQ9H788 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.96■□□□□ 0.63
SH2D4AQ9H788 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.96■□□□□ 0.63
SH2D4AQ9H788 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.96■□□□□ 0.63
SH2D4AQ9H788 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.95■□□□□ 0.62
SH2D4AQ9H788 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 POU5F1P6-201ENST00000466990 990 ntBASIC18.95■□□□□ 0.62
SH2D4AQ9H788 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 MIR4321-201ENST00000592276 80 ntBASIC18.95■□□□□ 0.62
SH2D4AQ9H788 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.95■□□□□ 0.62
SH2D4AQ9H788 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.95■□□□□ 0.62
SH2D4AQ9H788 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.95■□□□□ 0.62
SH2D4AQ9H788 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.95■□□□□ 0.62
SH2D4AQ9H788 MIR6069-201ENST00000620069 79 ntBASIC18.95■□□□□ 0.62
SH2D4AQ9H788 AC025048.6-201ENST00000634326 1161 ntBASIC18.95■□□□□ 0.62
SH2D4AQ9H788 AL033527.5-202ENST00000641632 1098 ntBASIC18.95■□□□□ 0.62
SH2D4AQ9H788 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SH2D4AQ9H788 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms