Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 AC139887.3-201ENST00000568585 713 ntBASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 MIR3180-1-201ENST00000580374 94 ntBASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 MIR3180-3-201ENST00000584616 94 ntBASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 AC026748.1-201ENST00000624349 3251 ntBASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC28BQ9BUN5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 AC005622.1-201ENST00000636801 1703 ntBASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 PTCHD3P3-201ENST00000403073 906 ntBASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 KRT16P4-201ENST00000453883 522 ntBASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 AC107918.2-201ENST00000530817 355 ntBASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 AC005412.3-201ENST00000580309 715 ntBASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 AC004706.3-202ENST00000621574 984 ntBASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 PI4KAP1-204ENST00000612579 1703 ntBASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC28BQ9BUN5 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CCDC28BQ9BUN5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC28BQ9BUN5 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CCDC28BQ9BUN5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CCDC28BQ9BUN5 SSR4P1-203ENST00000599569 2260 ntBASIC15.93■□□□□ 0.14
CCDC28BQ9BUN5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC28BQ9BUN5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC28BQ9BUN5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC28BQ9BUN5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC28BQ9BUN5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CCDC28BQ9BUN5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC28BQ9BUN5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
CCDC28BQ9BUN5 AC020658.6-201ENST00000623564 1870 ntBASIC15.93■□□□□ 0.14
CCDC28BQ9BUN5 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms