Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPN18Q99952 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPN18Q99952 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPN18Q99952 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.46■□□□□ 0.55
PTPN18Q99952 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPN18Q99952 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.46■□□□□ 0.55
PTPN18Q99952 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPN18Q99952 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.46■□□□□ 0.55
PTPN18Q99952 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPN18Q99952 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPN18Q99952 AC009486.1-201ENST00000569860 813 ntBASIC18.46■□□□□ 0.55
PTPN18Q99952 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.46■□□□□ 0.55
PTPN18Q99952 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.46■□□□□ 0.55
PTPN18Q99952 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PTPN18Q99952 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPN18Q99952 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PTPN18Q99952 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PTPN18Q99952 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.46■□□□□ 0.54
PTPN18Q99952 AL603756.1-201ENST00000606511 2163 ntBASIC18.45■□□□□ 0.54
PTPN18Q99952 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN18Q99952 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN18Q99952 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PTPN18Q99952 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN18Q99952 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN18Q99952 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
PTPN18Q99952 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PTPN18Q99952 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN18Q99952 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN18Q99952 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN18Q99952 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN18Q99952 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN18Q99952 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.45■□□□□ 0.54
PTPN18Q99952 GNRHR2-203ENST00000581100 1187 ntBASIC18.45■□□□□ 0.54
PTPN18Q99952 RN7SL190P-201ENST00000582519 257 ntBASIC18.45■□□□□ 0.54
PTPN18Q99952 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PTPN18Q99952 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.45■□□□□ 0.54
PTPN18Q99952 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PTPN18Q99952 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN18Q99952 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN18Q99952 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.45■□□□□ 0.54
PTPN18Q99952 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN18Q99952 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN18Q99952 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN18Q99952 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN18Q99952 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN18Q99952 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN18Q99952 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.44■□□□□ 0.54
PTPN18Q99952 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN18Q99952 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PTPN18Q99952 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN18Q99952 KRT8P37-201ENST00000451609 1420 ntBASIC18.44■□□□□ 0.54
PTPN18Q99952 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN18Q99952 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PTPN18Q99952 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN18Q99952 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN18Q99952 SLC25A24P2-201ENST00000415059 510 ntBASIC18.44■□□□□ 0.54
PTPN18Q99952 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.44■□□□□ 0.54
PTPN18Q99952 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.44■□□□□ 0.54
PTPN18Q99952 IGHJ2P-201ENST00000454480 60 ntBASIC18.44■□□□□ 0.54
PTPN18Q99952 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN18Q99952 VDAC1P7-201ENST00000462417 847 ntBASIC18.44■□□□□ 0.54
PTPN18Q99952 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.44■□□□□ 0.54
PTPN18Q99952 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.44■□□□□ 0.54
PTPN18Q99952 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN18Q99952 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN18Q99952 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN18Q99952 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN18Q99952 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PTPN18Q99952 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN18Q99952 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN18Q99952 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
PTPN18Q99952 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PTPN18Q99952 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN18Q99952 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN18Q99952 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN18Q99952 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN18Q99952 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN18Q99952 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN18Q99952 AL607033.1-201ENST00000623900 1599 ntBASIC18.43■□□□□ 0.54
PTPN18Q99952 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PTPN18Q99952 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN18Q99952 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN18Q99952 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.43■□□□□ 0.54
PTPN18Q99952 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN18Q99952 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PTPN18Q99952 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.43■□□□□ 0.54
PTPN18Q99952 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PTPN18Q99952 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms