Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.02□□□□□ -0.16
COL12A1Q99715 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL12A1Q99715 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COL12A1Q99715 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
COL12A1Q99715 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL12A1Q99715 RPL13P2-201ENST00000440687 659 ntBASIC14.02□□□□□ -0.16
COL12A1Q99715 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.02□□□□□ -0.16
COL12A1Q99715 PRKXP1-201ENST00000561423 1122 ntBASIC14.02□□□□□ -0.16
COL12A1Q99715 AC124283.3-201ENST00000570869 594 ntBASIC14.02□□□□□ -0.16
COL12A1Q99715 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
COL12A1Q99715 AL049840.4-201ENST00000602422 811 ntBASIC14.02□□□□□ -0.16
COL12A1Q99715 CU633904.3-201ENST00000624042 1029 ntBASIC14.02□□□□□ -0.16
COL12A1Q99715 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.02□□□□□ -0.16
COL12A1Q99715 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
COL12A1Q99715 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL12A1Q99715 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL12A1Q99715 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL12A1Q99715 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL12A1Q99715 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL12A1Q99715 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL12A1Q99715 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.02□□□□□ -0.17
COL12A1Q99715 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.02□□□□□ -0.17
COL12A1Q99715 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL12A1Q99715 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL12A1Q99715 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.02□□□□□ -0.17
COL12A1Q99715 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.02□□□□□ -0.17
COL12A1Q99715 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
COL12A1Q99715 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.02□□□□□ -0.17
COL12A1Q99715 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
COL12A1Q99715 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.02□□□□□ -0.17
COL12A1Q99715 LINC01451-201ENST00000623792 534 ntBASIC14.02□□□□□ -0.17
COL12A1Q99715 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL12A1Q99715 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL12A1Q99715 AC092053.1-201ENST00000605787 1936 ntBASIC14.02□□□□□ -0.17
COL12A1Q99715 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.02□□□□□ -0.17
COL12A1Q99715 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL12A1Q99715 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COL12A1Q99715 UBALD1-205ENST00000590891 2641 ntBASIC14.02□□□□□ -0.17
COL12A1Q99715 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC14.01□□□□□ -0.17
COL12A1Q99715 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.01□□□□□ -0.17
COL12A1Q99715 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
COL12A1Q99715 LINC01115-203ENST00000606068 577 ntBASIC14.01□□□□□ -0.17
COL12A1Q99715 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.01□□□□□ -0.17
COL12A1Q99715 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.01□□□□□ -0.17
COL12A1Q99715 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
COL12A1Q99715 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
COL12A1Q99715 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.01□□□□□ -0.17
COL12A1Q99715 ABALON-201ENST00000629058 1903 ntBASIC14.01□□□□□ -0.17
COL12A1Q99715 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COL12A1Q99715 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 AC093724.1-201ENST00000448659 1027 ntBASIC14.01□□□□□ -0.17
COL12A1Q99715 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.01□□□□□ -0.17
COL12A1Q99715 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.01□□□□□ -0.17
COL12A1Q99715 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.01□□□□□ -0.17
COL12A1Q99715 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.01□□□□□ -0.17
COL12A1Q99715 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.01□□□□□ -0.17
COL12A1Q99715 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.01□□□□□ -0.17
COL12A1Q99715 YRDCP1-201ENST00000621419 643 ntBASIC14.01□□□□□ -0.17
COL12A1Q99715 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
COL12A1Q99715 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
COL12A1Q99715 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.01□□□□□ -0.17
COL12A1Q99715 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.01□□□□□ -0.17
COL12A1Q99715 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
COL12A1Q99715 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
COL12A1Q99715 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
COL12A1Q99715 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
COL12A1Q99715 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COL12A1Q99715 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
COL12A1Q99715 MIR769-201ENST00000390225 118 ntBASIC14.01□□□□□ -0.17
COL12A1Q99715 IDS-203ENST00000428056 1213 ntTSL 2 BASIC14.01□□□□□ -0.17
COL12A1Q99715 RN7SL11P-201ENST00000471305 293 ntBASIC14.01□□□□□ -0.17
COL12A1Q99715 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC14.01□□□□□ -0.17
COL12A1Q99715 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
COL12A1Q99715 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
COL12A1Q99715 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.01□□□□□ -0.17
COL12A1Q99715 TNXA-203ENST00000507684 2038 ntBASIC14.01□□□□□ -0.17
COL12A1Q99715 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL12A1Q99715 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.01□□□□□ -0.17
COL12A1Q99715 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.01□□□□□ -0.17
COL12A1Q99715 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14□□□□□ -0.17
COL12A1Q99715 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms