Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
BBS4Q96RK4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BBS4Q96RK4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 AC008741.2-201ENST00000612792 3115 ntBASIC15.54■□□□□ 0.08
BBS4Q96RK4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 MED15P5-201ENST00000423150 992 ntBASIC15.54■□□□□ 0.08
BBS4Q96RK4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 AL591424.1-201ENST00000442569 1213 ntBASIC15.54■□□□□ 0.08
BBS4Q96RK4 KRT18P34-201ENST00000488218 1270 ntBASIC15.54■□□□□ 0.08
BBS4Q96RK4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 SLC25A1P1-201ENST00000528351 927 ntBASIC15.54■□□□□ 0.08
BBS4Q96RK4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 AC109635.5-201ENST00000533593 962 ntBASIC15.54■□□□□ 0.08
BBS4Q96RK4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 AL596087.1-201ENST00000400979 1969 ntBASIC15.54■□□□□ 0.08
BBS4Q96RK4 REXO1L8P-201ENST00000604378 1897 ntBASIC15.54■□□□□ 0.08
BBS4Q96RK4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.54■□□□□ 0.08
BBS4Q96RK4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BBS4Q96RK4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
BBS4Q96RK4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BBS4Q96RK4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
BBS4Q96RK4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
BBS4Q96RK4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BBS4Q96RK4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BBS4Q96RK4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BBS4Q96RK4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 AC140658.5-201ENST00000438532 169 ntBASIC15.53■□□□□ 0.08
BBS4Q96RK4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BBS4Q96RK4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 AC106730.1-201ENST00000566722 1090 ntBASIC15.53■□□□□ 0.08
BBS4Q96RK4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BBS4Q96RK4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BBS4Q96RK4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
BBS4Q96RK4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BBS4Q96RK4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
BBS4Q96RK4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BBS4Q96RK4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms