Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NBPF4Q96M43 AC012313.1-201ENST00000593393 3059 ntBASIC21.29■■□□□ 1
NBPF4Q96M43 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
NBPF4Q96M43 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NBPF4Q96M43 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC21.29■■□□□ 1
NBPF4Q96M43 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC21.29■■□□□ 1
NBPF4Q96M43 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NBPF4Q96M43 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC21.29■■□□□ 1
NBPF4Q96M43 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
NBPF4Q96M43 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC21.29■■□□□ 1
NBPF4Q96M43 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NBPF4Q96M43 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NBPF4Q96M43 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC21.29■■□□□ 1
NBPF4Q96M43 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC21.29■■□□□ 1
NBPF4Q96M43 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC21.29■■□□□ 1
NBPF4Q96M43 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC21.29■■□□□ 1
NBPF4Q96M43 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
NBPF4Q96M43 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC21.29■■□□□ 1
NBPF4Q96M43 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC21.29■■□□□ 1
NBPF4Q96M43 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
NBPF4Q96M43 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
NBPF4Q96M43 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC21.29■■□□□ 1
NBPF4Q96M43 AL158212.4-201ENST00000624062 1286 ntBASIC21.29■■□□□ 1
NBPF4Q96M43 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
NBPF4Q96M43 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
NBPF4Q96M43 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC21.29■■□□□ 1
NBPF4Q96M43 DEK-201ENST00000244776 1441 ntTSL 2 BASIC21.29■■□□□ 1
NBPF4Q96M43 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NBPF4Q96M43 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC21.28■■□□□ 1
NBPF4Q96M43 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC21.28■■□□□ 1
NBPF4Q96M43 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NBPF4Q96M43 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC21.28■■□□□ 1
NBPF4Q96M43 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC21.28■■□□□ 1
NBPF4Q96M43 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.28■■□□□ 1
NBPF4Q96M43 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NBPF4Q96M43 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.28■■□□□ 1
NBPF4Q96M43 HIST1H2BPS3-201ENST00000419683 341 ntBASIC21.28■■□□□ 1
NBPF4Q96M43 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC21.28■■□□□ 1
NBPF4Q96M43 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC21.28■■□□□ 1
NBPF4Q96M43 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC21.28■■□□□ 1
NBPF4Q96M43 AC010319.3-201ENST00000597028 470 ntBASIC21.28■■□□□ 1
NBPF4Q96M43 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC21.28■■□□□ 1
NBPF4Q96M43 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
NBPF4Q96M43 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NBPF4Q96M43 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NBPF4Q96M43 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
NBPF4Q96M43 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
NBPF4Q96M43 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
NBPF4Q96M43 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC21.28■■□□□ 1
NBPF4Q96M43 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NBPF4Q96M43 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.28■■□□□ 1
NBPF4Q96M43 AC005332.8-201ENST00000622750 2735 ntBASIC21.28■■□□□ 1
NBPF4Q96M43 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NBPF4Q96M43 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NBPF4Q96M43 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC21.27■■□□□ 1
NBPF4Q96M43 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
NBPF4Q96M43 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.27■■□□□ 1
NBPF4Q96M43 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC21.27■■□□□ 1
NBPF4Q96M43 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NBPF4Q96M43 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC21.27■■□□□ 1
NBPF4Q96M43 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
NBPF4Q96M43 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NBPF4Q96M43 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC21.27■■□□□ 1
NBPF4Q96M43 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NBPF4Q96M43 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC21.27■■□□□ 1
NBPF4Q96M43 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC21.27■■□□□ 1
NBPF4Q96M43 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC21.27■■□□□ 1
NBPF4Q96M43 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC21.27■■□□□ 1
NBPF4Q96M43 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.27■■□□□ 1
NBPF4Q96M43 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC21.27■■□□□ 1
NBPF4Q96M43 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
NBPF4Q96M43 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC21.27■■□□□ 1
NBPF4Q96M43 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC21.27■■□□□ 1
NBPF4Q96M43 WNT11-204ENST00000621122 789 ntTSL 5 BASIC21.27■■□□□ 1
NBPF4Q96M43 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC21.27■■□□□ 1
NBPF4Q96M43 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NBPF4Q96M43 KRT8P37-201ENST00000451609 1420 ntBASIC21.27■■□□□ 1
NBPF4Q96M43 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC21.27■■□□□ 1
NBPF4Q96M43 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NBPF4Q96M43 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NBPF4Q96M43 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC21.27■□□□□ 0.99
NBPF4Q96M43 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
NBPF4Q96M43 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NBPF4Q96M43 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NBPF4Q96M43 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NBPF4Q96M43 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NBPF4Q96M43 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NBPF4Q96M43 TARDBPP1-201ENST00000442013 1203 ntBASIC21.26■□□□□ 0.99
NBPF4Q96M43 POU5F1P6-201ENST00000466990 990 ntBASIC21.26■□□□□ 0.99
NBPF4Q96M43 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC21.26■□□□□ 0.99
NBPF4Q96M43 USP32P1-208ENST00000506594 1164 ntBASIC21.26■□□□□ 0.99
NBPF4Q96M43 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
NBPF4Q96M43 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC21.26■□□□□ 0.99
NBPF4Q96M43 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
NBPF4Q96M43 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC21.26■□□□□ 0.99
NBPF4Q96M43 COX11-210ENST00000639671 696 ntBASIC21.26■□□□□ 0.99
NBPF4Q96M43 AL033527.4-201ENST00000641026 673 ntBASIC21.26■□□□□ 0.99
NBPF4Q96M43 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
NBPF4Q96M43 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NBPF4Q96M43 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms