Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ITCHQ96J02 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.63■□□□□ 0.09
ITCHQ96J02 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ITCHQ96J02 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.63■□□□□ 0.09
ITCHQ96J02 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.63■□□□□ 0.09
ITCHQ96J02 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ITCHQ96J02 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
ITCHQ96J02 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.63■□□□□ 0.09
ITCHQ96J02 AC012569.1-201ENST00000591191 1524 ntBASIC15.63■□□□□ 0.09
ITCHQ96J02 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ITCHQ96J02 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
ITCHQ96J02 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.63■□□□□ 0.09
ITCHQ96J02 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
ITCHQ96J02 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.62■□□□□ 0.09
ITCHQ96J02 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
ITCHQ96J02 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.62■□□□□ 0.09
ITCHQ96J02 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
ITCHQ96J02 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.62■□□□□ 0.09
ITCHQ96J02 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
ITCHQ96J02 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.62■□□□□ 0.09
ITCHQ96J02 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
ITCHQ96J02 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.62■□□□□ 0.09
ITCHQ96J02 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 AKR1C7P-201ENST00000305623 895 ntBASIC15.62■□□□□ 0.09
ITCHQ96J02 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.62■□□□□ 0.09
ITCHQ96J02 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ITCHQ96J02 AC073621.1-201ENST00000392730 636 ntBASIC15.62■□□□□ 0.09
ITCHQ96J02 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.62■□□□□ 0.09
ITCHQ96J02 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.62■□□□□ 0.09
ITCHQ96J02 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 OR7E14P-202ENST00000530490 1290 ntBASIC15.62■□□□□ 0.09
ITCHQ96J02 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.62■□□□□ 0.09
ITCHQ96J02 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.62■□□□□ 0.09
ITCHQ96J02 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ITCHQ96J02 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.62■□□□□ 0.09
ITCHQ96J02 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.62■□□□□ 0.09
ITCHQ96J02 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.62■□□□□ 0.09
ITCHQ96J02 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 MIR1199-201ENST00000621445 119 ntBASIC15.62■□□□□ 0.09
ITCHQ96J02 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.62■□□□□ 0.09
ITCHQ96J02 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.62■□□□□ 0.09
ITCHQ96J02 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.62■□□□□ 0.09
ITCHQ96J02 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
ITCHQ96J02 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.62■□□□□ 0.09
ITCHQ96J02 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.62■□□□□ 0.09
ITCHQ96J02 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.62■□□□□ 0.09
ITCHQ96J02 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ITCHQ96J02 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ITCHQ96J02 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ITCHQ96J02 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
ITCHQ96J02 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.61■□□□□ 0.09
ITCHQ96J02 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
ITCHQ96J02 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ITCHQ96J02 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ITCHQ96J02 AC104640.1-201ENST00000562617 2109 ntBASIC15.61■□□□□ 0.09
ITCHQ96J02 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ITCHQ96J02 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.61■□□□□ 0.09
ITCHQ96J02 AL136379.1-201ENST00000623471 2642 ntBASIC15.61■□□□□ 0.09
ITCHQ96J02 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ITCHQ96J02 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.61■□□□□ 0.09
ITCHQ96J02 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.61■□□□□ 0.09
ITCHQ96J02 DUSP5P1-201ENST00000441325 1139 ntBASIC15.61■□□□□ 0.09
ITCHQ96J02 AF238378.1-201ENST00000526806 358 ntBASIC15.61■□□□□ 0.09
ITCHQ96J02 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.61■□□□□ 0.09
ITCHQ96J02 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ITCHQ96J02 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
ITCHQ96J02 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
ITCHQ96J02 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ITCHQ96J02 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ITCHQ96J02 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ITCHQ96J02 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ITCHQ96J02 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ITCHQ96J02 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
ITCHQ96J02 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ITCHQ96J02 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ITCHQ96J02 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.61■□□□□ 0.09
ITCHQ96J02 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ITCHQ96J02 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms