Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX11Q96FC9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX11Q96FC9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX11Q96FC9 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX11Q96FC9 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.44■□□□□ 0.7
DDX11Q96FC9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 KRT8P48-201ENST00000515599 1220 ntBASIC19.44■□□□□ 0.7
DDX11Q96FC9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX11Q96FC9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX11Q96FC9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX11Q96FC9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX11Q96FC9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX11Q96FC9 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX11Q96FC9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.43■□□□□ 0.7
DDX11Q96FC9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX11Q96FC9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX11Q96FC9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX11Q96FC9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX11Q96FC9 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX11Q96FC9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.43■□□□□ 0.7
DDX11Q96FC9 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX11Q96FC9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX11Q96FC9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX11Q96FC9 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX11Q96FC9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX11Q96FC9 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.43■□□□□ 0.7
DDX11Q96FC9 AL627223.1-201ENST00000416693 442 ntBASIC19.43■□□□□ 0.7
DDX11Q96FC9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.43■□□□□ 0.7
DDX11Q96FC9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.43■□□□□ 0.7
DDX11Q96FC9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
DDX11Q96FC9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
DDX11Q96FC9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX11Q96FC9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.43■□□□□ 0.7
DDX11Q96FC9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.43■□□□□ 0.7
DDX11Q96FC9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX11Q96FC9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX11Q96FC9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX11Q96FC9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX11Q96FC9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX11Q96FC9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX11Q96FC9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX11Q96FC9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX11Q96FC9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX11Q96FC9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX11Q96FC9 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 FER1L4-210ENST00000615531 5998 ntBASIC19.42■□□□□ 0.7
DDX11Q96FC9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.42■□□□□ 0.7
DDX11Q96FC9 AL592309.1-201ENST00000443127 649 ntBASIC19.42■□□□□ 0.7
DDX11Q96FC9 FAM86GP-201ENST00000448322 971 ntBASIC19.42■□□□□ 0.7
DDX11Q96FC9 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 AC093520.2-201ENST00000561830 333 ntBASIC19.42■□□□□ 0.7
DDX11Q96FC9 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 AL139384.1-201ENST00000612143 3047 ntBASIC19.42■□□□□ 0.7
DDX11Q96FC9 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
DDX11Q96FC9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX11Q96FC9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX11Q96FC9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX11Q96FC9 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX11Q96FC9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX11Q96FC9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms