Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 RN7SL618P-201ENST00000477850 296 ntBASIC17.66■□□□□ 0.42
PGBD4Q96DM1 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 AC005225.4-201ENST00000557330 545 ntBASIC17.66■□□□□ 0.42
PGBD4Q96DM1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 AC009407.1-201ENST00000568958 598 ntBASIC17.66■□□□□ 0.42
PGBD4Q96DM1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 AC011676.5-201ENST00000624864 2660 ntBASIC17.66■□□□□ 0.42
PGBD4Q96DM1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PGBD4Q96DM1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 BTBD7P1-201ENST00000447253 1453 ntBASIC17.65■□□□□ 0.42
PGBD4Q96DM1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 AC005034.1-201ENST00000426657 489 ntBASIC17.65■□□□□ 0.42
PGBD4Q96DM1 SPTLC1P1-201ENST00000447199 261 ntBASIC17.65■□□□□ 0.42
PGBD4Q96DM1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 ZNF890P-202ENST00000530367 1156 ntBASIC17.65■□□□□ 0.42
PGBD4Q96DM1 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 AC012645.4-201ENST00000610691 1061 ntBASIC17.65■□□□□ 0.42
PGBD4Q96DM1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 AC105020.1-201ENST00000435356 2205 ntBASIC17.65■□□□□ 0.42
PGBD4Q96DM1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 AC005915.1-201ENST00000624912 2018 ntBASIC17.65■□□□□ 0.42
PGBD4Q96DM1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 U82695.1-201ENST00000635752 1889 ntBASIC17.65■□□□□ 0.42
PGBD4Q96DM1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PGBD4Q96DM1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PGBD4Q96DM1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
PGBD4Q96DM1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.64■□□□□ 0.42
PGBD4Q96DM1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PGBD4Q96DM1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PGBD4Q96DM1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PGBD4Q96DM1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 AC005622.1-201ENST00000636801 1703 ntBASIC17.64■□□□□ 0.41
PGBD4Q96DM1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 AL139010.1-201ENST00000454878 894 ntBASIC17.64■□□□□ 0.41
PGBD4Q96DM1 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.64■□□□□ 0.41
PGBD4Q96DM1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 AL365330.1-201ENST00000607459 531 ntBASIC17.64■□□□□ 0.41
PGBD4Q96DM1 AC008738.7-201ENST00000609744 511 ntBASIC17.64■□□□□ 0.41
PGBD4Q96DM1 AL662799.1-202ENST00000614205 422 ntBASIC17.64■□□□□ 0.41
PGBD4Q96DM1 AL035252.4-201ENST00000624174 288 ntBASIC17.64■□□□□ 0.41
PGBD4Q96DM1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PGBD4Q96DM1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms