Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 AC140658.5-201ENST00000438532 169 ntBASIC14.35□□□□□ -0.11
SPTSSAQ969W0 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.35□□□□□ -0.11
SPTSSAQ969W0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 AC022188.1-201ENST00000620960 1664 ntBASIC14.35□□□□□ -0.11
SPTSSAQ969W0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 IL9RP2-201ENST00000423948 1312 ntBASIC14.35□□□□□ -0.11
SPTSSAQ969W0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 AL592424.1-201ENST00000563624 1536 ntBASIC14.35□□□□□ -0.11
SPTSSAQ969W0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 AL590627.1-203ENST00000421194 1026 ntBASIC14.34□□□□□ -0.11
SPTSSAQ969W0 AC092474.2-201ENST00000424288 719 ntBASIC14.34□□□□□ -0.11
SPTSSAQ969W0 AC007967.2-201ENST00000432613 625 ntBASIC14.34□□□□□ -0.11
SPTSSAQ969W0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 RNA5SP416-201ENST00000516838 111 ntBASIC14.34□□□□□ -0.11
SPTSSAQ969W0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 AL161645.1-201ENST00000622716 1255 ntBASIC14.34□□□□□ -0.11
SPTSSAQ969W0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.34□□□□□ -0.11
SPTSSAQ969W0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPTSSAQ969W0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SPTSSAQ969W0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPTSSAQ969W0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPTSSAQ969W0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPTSSAQ969W0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SPTSSAQ969W0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms