Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GCN1Q92616 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GCN1Q92616 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
GCN1Q92616 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GCN1Q92616 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GCN1Q92616 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
GCN1Q92616 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
GCN1Q92616 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
GCN1Q92616 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCN1Q92616 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GCN1Q92616 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCN1Q92616 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
GCN1Q92616 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCN1Q92616 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.89□□□□□ -0.19
GCN1Q92616 AC130709.1-201ENST00000484779 1212 ntBASIC13.89□□□□□ -0.19
GCN1Q92616 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GCN1Q92616 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.89□□□□□ -0.19
GCN1Q92616 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GCN1Q92616 LYSMD4-203ENST00000378904 2122 ntBASIC13.89□□□□□ -0.19
GCN1Q92616 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.89□□□□□ -0.19
GCN1Q92616 AL354989.2-201ENST00000435838 1540 ntBASIC13.89□□□□□ -0.19
GCN1Q92616 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCN1Q92616 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC13.89□□□□□ -0.19
GCN1Q92616 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCN1Q92616 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GCN1Q92616 AC023141.7-201ENST00000430646 407 ntBASIC13.89□□□□□ -0.19
GCN1Q92616 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.89□□□□□ -0.19
GCN1Q92616 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.89□□□□□ -0.19
GCN1Q92616 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.89□□□□□ -0.19
GCN1Q92616 PSME2-217ENST00000615264 874 ntTSL 5 BASIC13.89□□□□□ -0.19
GCN1Q92616 PSME2-218ENST00000630027 185 ntTSL 3 BASIC13.89□□□□□ -0.19
GCN1Q92616 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC13.89□□□□□ -0.19
GCN1Q92616 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
GCN1Q92616 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCN1Q92616 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCN1Q92616 CYP4F24P-201ENST00000586049 1580 ntBASIC13.89□□□□□ -0.19
GCN1Q92616 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GCN1Q92616 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.88□□□□□ -0.19
GCN1Q92616 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC13.88□□□□□ -0.19
GCN1Q92616 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.88□□□□□ -0.19
GCN1Q92616 TMCO5B-205ENST00000530020 894 ntBASIC13.88□□□□□ -0.19
GCN1Q92616 AC138466.5-201ENST00000624002 808 ntBASIC13.88□□□□□ -0.19
GCN1Q92616 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GCN1Q92616 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 CAP2P1-201ENST00000557743 1390 ntBASIC13.88□□□□□ -0.19
GCN1Q92616 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
GCN1Q92616 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC13.88□□□□□ -0.19
GCN1Q92616 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
GCN1Q92616 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
GCN1Q92616 ISCA2P1-201ENST00000425548 448 ntBASIC13.88□□□□□ -0.19
GCN1Q92616 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.88□□□□□ -0.19
GCN1Q92616 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.88□□□□□ -0.19
GCN1Q92616 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.88□□□□□ -0.19
GCN1Q92616 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.88□□□□□ -0.19
GCN1Q92616 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 AC005618.3-201ENST00000624928 458 ntBASIC13.88□□□□□ -0.19
GCN1Q92616 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.88□□□□□ -0.19
GCN1Q92616 BID-204ENST00000399767 2129 ntTSL 2 BASIC13.88□□□□□ -0.19
GCN1Q92616 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
GCN1Q92616 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
GCN1Q92616 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.88□□□□□ -0.19
GCN1Q92616 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.88□□□□□ -0.19
GCN1Q92616 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.88□□□□□ -0.19
GCN1Q92616 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCN1Q92616 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.87□□□□□ -0.19
GCN1Q92616 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GCN1Q92616 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.87□□□□□ -0.19
GCN1Q92616 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GCN1Q92616 AC024293.1-201ENST00000467930 498 ntBASIC13.87□□□□□ -0.19
GCN1Q92616 RN7SL396P-201ENST00000471086 295 ntBASIC13.87□□□□□ -0.19
GCN1Q92616 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.87□□□□□ -0.19
GCN1Q92616 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC13.87□□□□□ -0.19
GCN1Q92616 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC13.87□□□□□ -0.19
GCN1Q92616 THY1-209ENST00000580275 578 ntTSL 3 BASIC13.87□□□□□ -0.19
GCN1Q92616 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.87□□□□□ -0.19
GCN1Q92616 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.87□□□□□ -0.19
GCN1Q92616 AC073911.3-201ENST00000624401 631 ntBASIC13.87□□□□□ -0.19
GCN1Q92616 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
GCN1Q92616 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
GCN1Q92616 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.87□□□□□ -0.19
GCN1Q92616 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCN1Q92616 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.87□□□□□ -0.19
GCN1Q92616 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCN1Q92616 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms