Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.12■□□□□ 0.01
CNOT9Q92600 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CNOT9Q92600 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CNOT9Q92600 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT9Q92600 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.12■□□□□ 0.01
CNOT9Q92600 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.12■□□□□ 0.01
CNOT9Q92600 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.12■□□□□ 0.01
CNOT9Q92600 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.12■□□□□ 0.01
CNOT9Q92600 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 ZNF259P1-201ENST00000407656 1365 ntBASIC15.11■□□□□ 0.01
CNOT9Q92600 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.11■□□□□ 0.01
CNOT9Q92600 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.11■□□□□ 0.01
CNOT9Q92600 AC092919.2-201ENST00000623631 1645 ntBASIC15.11■□□□□ 0.01
CNOT9Q92600 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.11■□□□□ 0.01
CNOT9Q92600 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.11■□□□□ 0.01
CNOT9Q92600 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CNOT9Q92600 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.11■□□□□ 0.01
CNOT9Q92600 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CNOT9Q92600 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CNOT9Q92600 AC140658.5-201ENST00000438532 169 ntBASIC15.11■□□□□ 0.01
CNOT9Q92600 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CNOT9Q92600 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.11■□□□□ 0.01
CNOT9Q92600 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.11■□□□□ 0.01
CNOT9Q92600 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
CNOT9Q92600 AL513190.1-201ENST00000621254 727 ntBASIC15.11■□□□□ 0.01
CNOT9Q92600 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.11■□□□□ 0.01
CNOT9Q92600 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.11■□□□□ 0.01
CNOT9Q92600 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CNOT9Q92600 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CNOT9Q92600 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CNOT9Q92600 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.11■□□□□ 0.01
CNOT9Q92600 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.11■□□□□ 0.01
CNOT9Q92600 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CNOT9Q92600 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CNOT9Q92600 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CNOT9Q92600 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT9Q92600 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CNOT9Q92600 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT9Q92600 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT9Q92600 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT9Q92600 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT9Q92600 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT9Q92600 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT9Q92600 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT9Q92600 AC092474.2-201ENST00000424288 719 ntBASIC15.1■□□□□ 0.01
CNOT9Q92600 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.1■□□□□ 0.01
CNOT9Q92600 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.1■□□□□ 0.01
CNOT9Q92600 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.1■□□□□ 0.01
CNOT9Q92600 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.1■□□□□ 0.01
CNOT9Q92600 AC106730.1-201ENST00000566722 1090 ntBASIC15.1■□□□□ 0.01
CNOT9Q92600 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.1■□□□□ 0.01
CNOT9Q92600 AC140113.2-201ENST00000604370 208 ntBASIC15.1■□□□□ 0.01
CNOT9Q92600 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT9Q92600 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CNOT9Q92600 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT9Q92600 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CNOT9Q92600 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT9Q92600 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CNOT9Q92600 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT9Q92600 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CNOT9Q92600 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
CNOT9Q92600 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CNOT9Q92600 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT9Q92600 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.09■□□□□ 0.01
CNOT9Q92600 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT9Q92600 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms