Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SHC3Q92529 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SHC3Q92529 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SHC3Q92529 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.39■□□□□ 0.38
SHC3Q92529 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.39■□□□□ 0.38
SHC3Q92529 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SHC3Q92529 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC3Q92529 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.39■□□□□ 0.37
SHC3Q92529 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC3Q92529 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHC3Q92529 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC3Q92529 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC3Q92529 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SHC3Q92529 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.39■□□□□ 0.37
SHC3Q92529 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.39■□□□□ 0.37
SHC3Q92529 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.39■□□□□ 0.37
SHC3Q92529 AC079140.1-201ENST00000508039 487 ntBASIC17.39■□□□□ 0.37
SHC3Q92529 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.39■□□□□ 0.37
SHC3Q92529 AC061975.2-201ENST00000581722 295 ntBASIC17.39■□□□□ 0.37
SHC3Q92529 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.39■□□□□ 0.37
SHC3Q92529 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.39■□□□□ 0.37
SHC3Q92529 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.39■□□□□ 0.37
SHC3Q92529 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
SHC3Q92529 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC3Q92529 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC3Q92529 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.39■□□□□ 0.37
SHC3Q92529 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SHC3Q92529 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHC3Q92529 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SHC3Q92529 AP005117.1-202ENST00000581724 1908 ntBASIC17.39■□□□□ 0.37
SHC3Q92529 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.39■□□□□ 0.37
SHC3Q92529 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC3Q92529 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.39■□□□□ 0.37
SHC3Q92529 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC3Q92529 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC3Q92529 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.38■□□□□ 0.37
SHC3Q92529 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
SHC3Q92529 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SHC3Q92529 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC3Q92529 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.38■□□□□ 0.37
SHC3Q92529 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.38■□□□□ 0.37
SHC3Q92529 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC3Q92529 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SHC3Q92529 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SHC3Q92529 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC3Q92529 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC3Q92529 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.38■□□□□ 0.37
SHC3Q92529 SPDYE11-202ENST00000450699 704 ntBASIC17.38■□□□□ 0.37
SHC3Q92529 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SHC3Q92529 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.38■□□□□ 0.37
SHC3Q92529 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.38■□□□□ 0.37
SHC3Q92529 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.38■□□□□ 0.37
SHC3Q92529 AP000842.3-202ENST00000569238 1080 ntBASIC17.38■□□□□ 0.37
SHC3Q92529 SPDYE9P-201ENST00000570642 692 ntBASIC17.38■□□□□ 0.37
SHC3Q92529 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.38■□□□□ 0.37
SHC3Q92529 SPDYE10P-202ENST00000612005 668 ntBASIC17.38■□□□□ 0.37
SHC3Q92529 SPDYE8P-202ENST00000612377 668 ntBASIC17.38■□□□□ 0.37
SHC3Q92529 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.38■□□□□ 0.37
SHC3Q92529 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SHC3Q92529 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.38■□□□□ 0.37
SHC3Q92529 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHC3Q92529 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC3Q92529 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SHC3Q92529 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.38■□□□□ 0.37
SHC3Q92529 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHC3Q92529 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.38■□□□□ 0.37
SHC3Q92529 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC3Q92529 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.38■□□□□ 0.37
SHC3Q92529 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.38■□□□□ 0.37
SHC3Q92529 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC3Q92529 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.38■□□□□ 0.37
SHC3Q92529 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC3Q92529 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.38■□□□□ 0.37
SHC3Q92529 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
SHC3Q92529 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.38■□□□□ 0.37
SHC3Q92529 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC3Q92529 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.38■□□□□ 0.37
SHC3Q92529 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.38■□□□□ 0.37
SHC3Q92529 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.37■□□□□ 0.37
SHC3Q92529 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC3Q92529 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SHC3Q92529 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC3Q92529 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SHC3Q92529 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.37■□□□□ 0.37
SHC3Q92529 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC3Q92529 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SHC3Q92529 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC3Q92529 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC3Q92529 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.37■□□□□ 0.37
SHC3Q92529 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SHC3Q92529 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.37■□□□□ 0.37
SHC3Q92529 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SHC3Q92529 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.37■□□□□ 0.37
SHC3Q92529 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.37■□□□□ 0.37
SHC3Q92529 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.37■□□□□ 0.37
SHC3Q92529 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.37■□□□□ 0.37
SHC3Q92529 AC084121.4-201ENST00000641598 221 ntBASIC17.37■□□□□ 0.37
SHC3Q92529 AF228730.8-201ENST00000642140 221 ntBASIC17.37■□□□□ 0.37
SHC3Q92529 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC3Q92529 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms