Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 AL353729.2-201ENST00000605859 1249 ntBASIC16.61■□□□□ 0.25
PTCD2Q8WV60 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 REXO1L8P-201ENST00000604378 1897 ntBASIC16.61■□□□□ 0.25
PTCD2Q8WV60 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 AP000568.1-201ENST00000282964 442 ntBASIC16.6■□□□□ 0.25
PTCD2Q8WV60 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 ADH5P3-201ENST00000433842 1137 ntBASIC16.6■□□□□ 0.25
PTCD2Q8WV60 AC140658.5-201ENST00000438532 169 ntBASIC16.6■□□□□ 0.25
PTCD2Q8WV60 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.6■□□□□ 0.25
PTCD2Q8WV60 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTCD2Q8WV60 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 PCDHA1-201ENST00000378133 2726 ntBASIC16.59■□□□□ 0.25
PTCD2Q8WV60 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms