Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
U2AF1L4Q8WU68 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
U2AF1L4Q8WU68 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
U2AF1L4Q8WU68 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.64■□□□□ 0.58
U2AF1L4Q8WU68 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
U2AF1L4Q8WU68 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
U2AF1L4Q8WU68 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
U2AF1L4Q8WU68 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 RN7SL618P-201ENST00000477850 296 ntBASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 AC055876.2-201ENST00000531834 546 ntBASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 SNX29P1-201ENST00000548357 1007 ntBASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 BANF1P1-201ENST00000553684 263 ntBASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 AC105021.1-202ENST00000570572 669 ntBASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 MIR6787-201ENST00000616675 61 ntBASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2AF1L4Q8WU68 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 AC124067.4-201ENST00000519691 2379 ntBASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 AC131009.4-201ENST00000624048 1740 ntBASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 FAM220BP-201ENST00000377689 816 ntBASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 SPDYE18-201ENST00000510091 1050 ntBASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 PRYP6-201ENST00000514804 343 ntBASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 AL133215.2-201ENST00000609242 977 ntBASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 GPR182-203ENST00000622922 591 ntBASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
U2AF1L4Q8WU68 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
U2AF1L4Q8WU68 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms