Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BCAS4Q8TDM0 AC107918.4-201ENST00000641966 3141 ntBASIC16.48■□□□□ 0.23
BCAS4Q8TDM0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 AGAP7P-201ENST00000582299 2062 ntBASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 AGAP14-201ENST00000624701 2060 ntBASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 AC005252.3-201ENST00000623855 2258 ntBASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 AC004817.3-201ENST00000602957 2129 ntBASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCAS4Q8TDM0 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 AC073648.6-201ENST00000641589 218 ntBASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 AL353692.3-201ENST00000407031 1396 ntBASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.46■□□□□ 0.23
BCAS4Q8TDM0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.46■□□□□ 0.22
BCAS4Q8TDM0 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms