Protein–RNA interactions for Protein: Q8TDG2

ACTRT1, Actin-related protein T1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT1Q8TDG2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 RNU1-129P-201ENST00000384064 167 ntBASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 AC136632.2-201ENST00000512891 861 ntBASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 U1.21-201ENST00000580816 167 ntBASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 MIR4515-201ENST00000584082 81 ntBASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 AL121772.3-201ENST00000610840 674 ntBASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ACTRT1Q8TDG2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ACTRT1Q8TDG2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
ACTRT1Q8TDG2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ACTRT1Q8TDG2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ACTRT1Q8TDG2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
ACTRT1Q8TDG2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ACTRT1Q8TDG2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
ACTRT1Q8TDG2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
ACTRT1Q8TDG2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.02■□□□□ 0.31
ACTRT1Q8TDG2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 AP003680.1-201ENST00000598970 3660 ntBASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 AC245100.5-201ENST00000452108 331 ntBASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.01■□□□□ 0.31
ACTRT1Q8TDG2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms