Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
RDH11Q8TC12 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.11■□□□□ 0.17
RDH11Q8TC12 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RDH11Q8TC12 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.11■□□□□ 0.17
RDH11Q8TC12 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
RDH11Q8TC12 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 AC073347.1-201ENST00000421633 2643 ntBASIC16.11■□□□□ 0.17
RDH11Q8TC12 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.11■□□□□ 0.17
RDH11Q8TC12 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.11■□□□□ 0.17
RDH11Q8TC12 TPM4P1-201ENST00000436100 807 ntBASIC16.11■□□□□ 0.17
RDH11Q8TC12 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.11■□□□□ 0.17
RDH11Q8TC12 AF238378.1-201ENST00000526806 358 ntBASIC16.11■□□□□ 0.17
RDH11Q8TC12 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.11■□□□□ 0.17
RDH11Q8TC12 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 AC008735.5-201ENST00000623544 497 ntBASIC16.11■□□□□ 0.17
RDH11Q8TC12 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.11■□□□□ 0.17
RDH11Q8TC12 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
RDH11Q8TC12 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.11■□□□□ 0.17
RDH11Q8TC12 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.11■□□□□ 0.17
RDH11Q8TC12 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.11■□□□□ 0.17
RDH11Q8TC12 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH11Q8TC12 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH11Q8TC12 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH11Q8TC12 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH11Q8TC12 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH11Q8TC12 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RDH11Q8TC12 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH11Q8TC12 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH11Q8TC12 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RDH11Q8TC12 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH11Q8TC12 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RDH11Q8TC12 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 HAUS4P1-201ENST00000406739 1145 ntBASIC16.1■□□□□ 0.17
RDH11Q8TC12 RPS2P1-201ENST00000434010 821 ntBASIC16.1■□□□□ 0.17
RDH11Q8TC12 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 FAM185BP-201ENST00000443595 716 ntBASIC16.1■□□□□ 0.17
RDH11Q8TC12 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 AC073648.2-201ENST00000510116 352 ntBASIC16.1■□□□□ 0.17
RDH11Q8TC12 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 AL356488.2-201ENST00000602755 427 ntBASIC16.1■□□□□ 0.17
RDH11Q8TC12 AL031055.1-201ENST00000606362 631 ntBASIC16.1■□□□□ 0.17
RDH11Q8TC12 ACTL9-202ENST00000612068 1252 ntBASIC16.1■□□□□ 0.17
RDH11Q8TC12 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RDH11Q8TC12 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RDH11Q8TC12 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RDH11Q8TC12 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH11Q8TC12 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH11Q8TC12 AC013268.4-201ENST00000637413 2228 ntBASIC16.1■□□□□ 0.17
RDH11Q8TC12 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH11Q8TC12 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.1■□□□□ 0.17
RDH11Q8TC12 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RDH11Q8TC12 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
RDH11Q8TC12 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.09■□□□□ 0.17
RDH11Q8TC12 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RDH11Q8TC12 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RDH11Q8TC12 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.09■□□□□ 0.17
RDH11Q8TC12 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RDH11Q8TC12 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RDH11Q8TC12 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
RDH11Q8TC12 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.09■□□□□ 0.17
RDH11Q8TC12 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.09■□□□□ 0.17
RDH11Q8TC12 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RDH11Q8TC12 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RDH11Q8TC12 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RDH11Q8TC12 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RDH11Q8TC12 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms